Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01114 and RBAM_006940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01114___purH.1.9828.seq
# -bsequence dna-align/RBAM_006940___purH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01114___purH-RBAM_006940___purH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01114___purH-RBAM_006940___purH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01114___purH
# 2: RBAM_006940___purH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1539
# Identity: 1263/1539 (82.1%)
# Similarity: 1263/1539 (82.1%)
# Gaps: 0/1539 ( 0.0%)
# Score: 5211.0
#
#
#=======================================
BSNT_01114___ 1 ATGACCATTAAACGTGCGTTAATCAGTGTTTCAGATAAAACAAATCTCGT 50
|||||.||.|||||.||..|||||||||||||.|||||||||||||||||
RBAM_006940__ 1 ATGACAATCAAACGCGCACTAATCAGTGTTTCTGATAAAACAAATCTCGT 50
BSNT_01114___ 51 TCCTTTCGTAAAAGAACTGACAGAGCTTGGCGTTGAAGTCATCTCCACAG 100
.|||||||||||.||||||||||||||.|||||.||||||||.||.||.|
RBAM_006940__ 51 ACCTTTCGTAAAGGAACTGACAGAGCTCGGCGTCGAAGTCATTTCGACCG 100
BSNT_01114___ 101 GCGGAACGAAAAAGCTTCTTCAAGAAAACGGTGTGGATGTGATCGGAATT 150
|.|||||.|||||.||||||||.|||||||||||||||||.|||||.|||
RBAM_006940__ 101 GAGGAACAAAAAAACTTCTTCAGGAAAACGGTGTGGATGTCATCGGCATT 150
BSNT_01114___ 151 TCGGAAGTGACAGGCTTCCCTGAAATTATGGACGGCCGGTTAAAAACCCT 200
||.||||||||.||.||.|||||||||||||||||.|||||||||||.||
RBAM_006940__ 151 TCAGAAGTGACCGGATTTCCTGAAATTATGGACGGACGGTTAAAAACGCT 200
BSNT_01114___ 201 TCACCCGAATATTCACGGCGGTCTTCTGGCGGTTCGCGGCAATGAAGAGC 250
.||.||.||||||||||||||.||.||.||.||..|.|..||||||||||
RBAM_006940__ 201 CCATCCTAATATTCACGGCGGACTGCTTGCCGTAAGAGATAATGAAGAGC 250
BSNT_01114___ 251 ATATGGCGCAGATCAATAAACACGGGATTCAGCCGATTGACCTCGTTGTC 300
|||||||||||||||||.|.||.||.|||...||.||||||||.||.|||
RBAM_006940__ 251 ATATGGCGCAGATCAATGAGCATGGCATTGCCCCCATTGACCTTGTGGTC 300
BSNT_01114___ 301 GTCAACCTCTATCCATTTAAAGAAACGATTTCTAAAGAAGACGTCACGTA 350
||||||||.||.||.|||||||||||||||||.|||||||||||.||.||
RBAM_006940__ 301 GTCAACCTTTACCCGTTTAAAGAAACGATTTCGAAAGAAGACGTAACATA 350
BSNT_01114___ 351 TGAAGAAGCAATCGAAAATATCGACATCGGCGGACCGGGCATGCTGCGTG 400
.||.|||||.||.|||||.||.||.||||||||.||.|||||||||||.|
RBAM_006940__ 351 CGATGAAGCGATAGAAAACATTGATATCGGCGGTCCCGGCATGCTGCGCG 400
BSNT_01114___ 401 CGGCATCAAAGAACCATCAGGATGTAACGGTTATCGTCGATCCGGCCGAT 450
|.|||||.||.||||||||||||||.|||||.|||...||||||||||||
RBAM_006940__ 401 CCGCATCGAAAAACCATCAGGATGTGACGGTCATCACAGATCCGGCCGAT 450
BSNT_01114___ 451 TACAGCCCAGTGCTGAGTCAAATCAAAGAAGAAGGCAGCGTATCTCTTCA 500
||||||.|.|||||.|.|.|.||.||||||.|.|||.||||.||.|||.|
RBAM_006940__ 451 TACAGCTCCGTGCTCAATGAGATTAAAGAACACGGCGGCGTTTCGCTTAA 500
BSNT_01114___ 501 GAAAAAACGCGAGCTCGCGGCAAAAGTATTCCGTCATACTGCGGCATATG 550
.|.||||||||||||.|||||.|||||||||||.|||||.||||||||.|
RBAM_006940__ 501 AAGAAAACGCGAGCTTGCGGCCAAAGTATTCCGCCATACCGCGGCATACG 550
BSNT_01114___ 551 ATGCACTGATCGCTGACTATCTGACAAATGTTGTCGGTGAAAAAGAACCA 600
|.|||.|.||||||||.||..|.|||...|..|.||||||.|||||.||.
RBAM_006940__ 551 ACGCATTAATCGCTGATTACTTAACACGCGAGGCCGGTGAGAAAGACCCT 600
BSNT_01114___ 601 GAGCAATTCACTGTTACATTTGAGAAAAAACAATCGCTTCGCTATGGAGA 650
|||||||||||.||||||||||||||||||||||||||.||||||||.||
RBAM_006940__ 601 GAGCAATTCACCGTTACATTTGAGAAAAAACAATCGCTCCGCTATGGTGA 650
BSNT_01114___ 651 AAACCCGCATCAGGAAGCAACTTTCTATCAAACAGCTCTTCCTGTCAAAG 700
||||||.||.||.||.||...|||||||||||..||.|||||.|||...|
RBAM_006940__ 651 AAACCCTCACCAAGAGGCTGTTTTCTATCAAAGCGCACTTCCCGTCTCCG 700
BSNT_01114___ 701 GCTCCATTGCGCAAGCAGAACAGCTTCACGGAAAAGAGCTTTCTTACAAC 750
|.|||||.|||...|||.|||||||||||||.||||||||||||||||||
RBAM_006940__ 701 GTTCCATCGCGGCGGCAAAACAGCTTCACGGCAAAGAGCTTTCTTACAAC 750
BSNT_01114___ 751 AACATGAAAGACGCGGATGCGGCAGTTCAAATCGTTCGTGAATTCACTGA 800
||.||.||.|||||.||||||||.|||||||||||.||.|||||.||.||
RBAM_006940__ 751 AATATTAAGGACGCAGATGCGGCCGTTCAAATCGTCCGGGAATTTACAGA 800
BSNT_01114___ 801 GCCGGCTGCGGTTGCCGTGAAGCATATGAACCCGTGCGGCGTGGGAACAG 850
.||.||.||.||||||||.||.|||||||||||||||||.||.||.||.|
RBAM_006940__ 801 ACCCGCAGCTGTTGCCGTTAAACATATGAACCCGTGCGGAGTCGGTACGG 850
BSNT_01114___ 851 GAAAAACGATCGCCGAAGCGTTTGACAGAGCGTTTGAAGCGGATAAAACA 900
||....|.||.|..|||||.||..|.|.|||||.||||||.||||||||.
RBAM_006940__ 851 GAGCTTCAATTGAGGAAGCATTCAATAAAGCGTATGAAGCTGATAAAACC 900
BSNT_01114___ 901 TCTATCTTCGGCGGCATTATCGCGTTGAACCGTGAAGTGGACAAGACAAC 950
||.||.|||||||||||.||||||.|||||||||||||.||..||.||||
RBAM_006940__ 901 TCCATTTTCGGCGGCATCATCGCGCTGAACCGTGAAGTTGATCAGGCAAC 950
BSNT_01114___ 951 TGCCGAAGCGCTTCATAACATTTTCTTAGAAATCATCATTGCGCCTTCAT 1000
.||.|||||.|||||...|||.||.|||||||||||.||.||.|||||.|
RBAM_006940__ 951 GGCTGAAGCCCTTCACGGCATCTTTTTAGAAATCATTATCGCCCCTTCTT 1000
BSNT_01114___ 1001 TCAGCCAAGAAGCGCTCGACGTCCTGACTGCGAAGAAAAATCTCCGCCTG 1050
||||..||||||||||..||||.|||||.|||||||||||.||.||.|||
RBAM_006940__ 1001 TCAGTGAAGAAGCGCTGAACGTACTGACGGCGAAGAAAAACCTTCGTCTG 1050
BSNT_01114___ 1051 CTGACGCTTGACGTATCTGCTGCTGTTCAAAAGGAAAAACAGCTGACATC 1100
||.|||||||||||.||.||..|.|...|.||.|||||||||||||||||
RBAM_006940__ 1051 CTCACGCTTGACGTGTCCGCATCAGGGAAGAAAGAAAAACAGCTGACATC 1100
BSNT_01114___ 1101 CGTTCAAGGCGGGCTATTGATTCAAGATTTAGATATGCACGGCTTTGATG 1150
|||.||.|||||.||.|||||||||||||||||..|.||.||.|||||||
RBAM_006940__ 1101 CGTACAGGGCGGCCTTTTGATTCAAGATTTAGACGTCCATGGATTTGATG 1150
BSNT_01114___ 1151 ATGCTGAGATTAGCATTCCGACAAAAAGAGAGCCGAACGAGCAAGAGTGG 1200
||||.||.||.|||||.|||||||||||||||||||.|||.||.||.|||
RBAM_006940__ 1151 ATGCCGACATCAGCATCCCGACAAAAAGAGAGCCGAGCGATCAGGAATGG 1200
BSNT_01114___ 1201 GAAGACTTGAAGCTTGCTTGGAAAGTCGTGAAGCATGTGAAATCAAATGC 1250
|||||.||||||.|.||.|||||||||||.||.|||||||||||.||.||
RBAM_006940__ 1201 GAAGATTTGAAGTTGGCCTGGAAAGTCGTCAAACATGTGAAATCCAACGC 1250
BSNT_01114___ 1251 GATTGTTCTCGCGAAGGACAACATGACAGTCGGCGTGGGAGCAGGCCAAA 1300
|||.|||||.||.||.|||.|.|||||.|||||.||||||||.||.||.|
RBAM_006940__ 1251 GATCGTTCTTGCAAAAGACCATATGACGGTCGGTGTGGGAGCGGGGCAGA 1300
BSNT_01114___ 1301 TGAACCGCGTCGGATCGGCAAAAATCGCAATCGAGCAAGCAGGGGAAAAA 1350
||||.||||||||.||.||.||||||||.||.|||||.||.||.||||||
RBAM_006940__ 1301 TGAATCGCGTCGGTTCAGCTAAAATCGCCATTGAGCAGGCCGGAGAAAAA 1350
BSNT_01114___ 1351 GCGAAAGGCAGTGCGCTCGGATCTGACGCATTTTTCCCAATGCCGGATAC 1400
||.||||||||.|||||||||||.|||||.||||||||.|||||||||||
RBAM_006940__ 1351 GCAAAAGGCAGCGCGCTCGGATCAGACGCGTTTTTCCCGATGCCGGATAC 1400
BSNT_01114___ 1401 TGTTGAAGAAGCAGCAAAAGCGGGCGTTACGGCTATCATTCAGCCGGGGG 1450
.||.||||||||.||||||||.||.||.|||||.||.||.|||||.||.|
RBAM_006940__ 1401 AGTCGAAGAAGCCGCAAAAGCCGGTGTCACGGCGATTATCCAGCCCGGCG 1450
BSNT_01114___ 1451 GATCTGTGCGTGACGAGGATTCCATCAAAAAAGCGGATGAATACGGCATT 1500
||||.||.||.||.||.|||||.||.|||||||||||||||||||||||.
RBAM_006940__ 1451 GATCGGTCCGCGATGAAGATTCGATTAAAAAAGCGGATGAATACGGCATC 1500
BSNT_01114___ 1501 GCCATGGTATTCACCGGCATCAGACACTTCAAACATTAA 1539
||||||||||||||||||||||||||.||||||||||||
RBAM_006940__ 1501 GCCATGGTATTCACCGGCATCAGACATTTCAAACATTAA 1539
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