Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01112 and RBAM_006930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01112___purN.1.9828.seq
# -bsequence dna-align/RBAM_006930___purN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01112___purN-RBAM_006930___purN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01112___purN-RBAM_006930___purN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01112___purN
# 2: RBAM_006930___purN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 465/601 (77.4%)
# Similarity: 465/601 (77.4%)
# Gaps: 26/601 ( 4.3%)
# Score: 1758.0
#
#
#=======================================
BSNT_01112___ 1 ATGAAAAAGTTTGCGGTATTTGCATCAGGAAACGGTTCAAACTTCGAAGC 50
|||||||||||||||||||||||.|||||||||||.||.||||||||.||
RBAM_006930__ 1 ATGAAAAAGTTTGCGGTATTTGCTTCAGGAAACGGATCGAACTTCGAGGC 50
BSNT_01112___ 51 CATCGTCACGCGTTTGAAGGAGGAGAACTGGGATGCGTCAGC-AGCGCTC 99
|||.|.||..||..|||..||.|||||.||||||||| .||| ..||||.
RBAM_006930__ 51 CATTGCCAAACGCATGAGAGAAGAGAAGTGGGATGCG-GAGCTCTCGCTT 99
BSNT_01112___ 100 CTCGTTTGCGAC----AAACCGCAGGCGAAAGTC-ATCGAACGGGCGGAA 144
||||| ||| ||.||.||||| ||||.| .|.|||.|||||||.
RBAM_006930__ 100 CTCGT----GACGGATAAGCCTCAGGC-AAAGGCGGTGGAAAGGGCGGAG 144
BSNT_01112___ 145 GCATTCCACATTCCATCCTTCTCATTTGAGCC--CAAGTCTTATGAAAAC 192
||.||.||||||||.||.|||.|.|||||.|| || ||||.|||||||
RBAM_006930__ 145 GCTTTACACATTCCGTCATTCGCCTTTGAACCGTCA--TCTTTTGAAAAC 192
BSNT_01112___ 193 AAGGCCGCATTTGAACAAGCCATCATTGAACAGCTTCGTCTTCACGAGGT 242
||.||.||.|||||||..|||.|.|||||||||||.||.||.||||.||.
RBAM_006930__ 193 AAAGCGGCCTTTGAACGGGCCGTTATTGAACAGCTGCGCCTGCACGGGGC 242
BSNT_01112___ 243 TGAATTGATTGTTCTTGCCGGCTATATGAGGCTGATCGGTGATACGCTCC 292
.|||||.||.|||||.||||||||||||||.|||||.||.||||||||.|
RBAM_006930__ 243 GGAATTAATCGTTCTCGCCGGCTATATGAGACTGATTGGAGATACGCTGC 292
BSNT_01112___ 293 TTCAAGCATATGGAGGAAAAATCATTAACATTCACCCGTCGCTTCTTCCG 342
||.|||||||.||.||....||.|||||.||.||.||.||||||||||||
RBAM_006930__ 293 TTGAAGCATACGGGGGCCGCATTATTAATATACATCCCTCGCTTCTTCCG 342
BSNT_01112___ 343 GCGTTTCCTGGAATCGACGCAGTCGGACAGGCGTTCCGGGCGGGTGTGAA 392
||.||.||.||.||.|||||.|||||||||||||..|||||.||||||||
RBAM_006930__ 343 GCATTCCCCGGGATTGACGCTGTCGGACAGGCGTATCGGGCCGGTGTGAA 392
BSNT_01112___ 393 GGTAGCAGGAATCACTGTGCATTATGTCGATGAAGGAATGGATACAGGTC 442
.||.||.||.||.||.||.|||||.|||||.|||||.|||||.||.||.|
RBAM_006930__ 393 AGTGGCGGGCATTACCGTTCATTACGTCGACGAAGGCATGGACACCGGAC 442
BSNT_01112___ 443 CGATCATCGCTCAAAAGGCAATCGAAATTGATGAACATGATAC-ATTGGA 491
||||.|||||.|||||.|||.|||||||..|.|||.|.||||| .|||.|
RBAM_006930__ 443 CGATTATCGCGCAAAAAGCATTCGAAATACAGGAAAACGATACGCTTGAA 492
BSNT_01112___ 492 AACAATCGA----ACAGCGGATTCACAAGCTTGAGCATAAATGGTATCCG 537
||| ||.|| ||| ||.|||.||||||||||.||||||||||||
RBAM_006930__ 493 AAC-ATAGAGCATACA----ATACACGAGCTTGAGCACAAATGGTATCCG 537
BSNT_01112___ 538 AGTGTGATTAAACAGCTATTAGGATTAAATAACAGAGGTGAAAAGGCATG 587
||.||..|.||||||||..|.|||.|||||||||||||||||||||||||
RBAM_006930__ 538 AGCGTTGTGAAACAGCTGCTGGGACTAAATAACAGAGGTGAAAAGGCATG 587
BSNT_01112___ 588 A 588
|
RBAM_006930__ 588 A 588
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