Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01111 and RBAM_006920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01111___purM.1.9828.seq
# -bsequence dna-align/RBAM_006920___purM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01111___purM-RBAM_006920___purM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01111___purM-RBAM_006920___purM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01111___purM
# 2: RBAM_006920___purM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1045
# Identity: 860/1045 (82.3%)
# Similarity: 860/1045 (82.3%)
# Gaps: 8/1045 ( 0.8%)
# Score: 3512.0
#
#
#=======================================
BSNT_01111___ 1 ATGTCTGAAGCATATAAAAACGCAGGAGTTGACATCGAAGCCGGATATGA 50
||||||||.||.||||||||.||.|||||||||||||||||||||||.||
RBAM_006920__ 1 ATGTCTGATGCTTATAAAAATGCCGGAGTTGACATCGAAGCCGGATACGA 50
BSNT_01111___ 51 AGCCGTAAAACGAATGAAAAAACACGTGGAGCGCACGAAACGGCTTGGCG 100
.|||||.||||||||||||||||||||||||||||||.||.||||.||||
RBAM_006920__ 51 GGCCGTCAAACGAATGAAAAAACACGTGGAGCGCACGCAAAGGCTCGGCG 100
BSNT_01111___ 101 TTATGGGCAGCCTTGGCGGTTTTGGCGGCATGTTTGACCTGTCTGAGCTT 150
|||||||.|||||.||||||||||||||.||||||||.|||||.||||||
RBAM_006920__ 101 TTATGGGAAGCCTGGGCGGTTTTGGCGGAATGTTTGATCTGTCAGAGCTT 150
BSNT_01111___ 151 TCTTATCAAAAACCAGTTCTCATTTCGGGAACGGACGGTGTCGGAACAAA 200
.|.||||||||.||.|||.|.|||||.|||||.|||||||||||.||.||
RBAM_006920__ 151 CCGTATCAAAAGCCTGTTTTAATTTCCGGAACAGACGGTGTCGGCACCAA 200
BSNT_01111___ 201 ATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTGGACG 250
..|.||.|||||.|||||.||||||||||||||||||||.|||||.||.|
RBAM_006920__ 201 GCTGAAACTCGCATTTTCAATGGATAAGCATGACACGATCGGCGTCGATG 250
BSNT_01111___ 251 CTGTTGCAATGTGTGTCAATGACGTGCTGGCACAAGGTGCAGAGCCGCTG 300
|.||.||.||||||||.|||||.|||||.||.|||||.||.|||||||||
RBAM_006920__ 251 CGGTCGCGATGTGTGTAAATGATGTGCTTGCCCAAGGAGCGGAGCCGCTG 300
BSNT_01111___ 301 TTTTTCCTCGATTATTTAGCGGTCGGCAAAGCGGACCCAGTGAAAATTGA 350
||||||||.||||||||||||||||||||.||.||.||.||.||||||||
RBAM_006920__ 301 TTTTTCCTAGATTATTTAGCGGTCGGCAAGGCCGATCCGGTAAAAATTGA 350
BSNT_01111___ 351 ACAGATTGTACAAGGTGTTGCGGAAGGCTGTGAGCAGTCAGGTTCAGC-C 399
.|||||.||.||.||.||.|||||.||.||.|||||||||||.||||| |
RBAM_006920__ 351 GCAGATCGTTCAGGGCGTGGCGGACGGATGCGAGCAGTCAGGATCAGCGC 400
BSNT_01111___ 400 TTAGTCGGCGGTGAAACGGCTGAAATGCCGGGACTCTATACAGCTGATGA 449
||| ||||||||||.|||||.|||||||||||.||.|||||.||||||||
RBAM_006920__ 401 TTA-TCGGCGGTGAGACGGCGGAAATGCCGGGGCTGTATACGGCTGATGA 449
BSNT_01111___ 450 ATACGATATTGCCGGTTTCTCAGTCGGAGTGGCAGAAAAGGACGAAATCG 499
||||||||||||.||.||.||||||||.||.||.|||||.||||||||||
RBAM_006920__ 450 ATACGATATTGCGGGCTTTTCAGTCGGCGTCGCGGAAAAAGACGAAATCG 499
BSNT_01111___ 500 TCACTGGAGAAAACATCAAAGAGGGTCATCTTTTGATCGGCCTCAGCTCC 549
||||.||.|||.|.|||.|||||||.|||||.||.|||||.||.|..||.
RBAM_006920__ 500 TCACCGGTGAACATATCGAAGAGGGGCATCTCTTAATCGGACTTACTTCA 549
BSNT_01111___ 550 AGCGGTCTTCACAGCAACGGATTTTCCCTTGTCAGAAAAGTGCTTCTGGA 599
|||||.||||||||||||||.||||||||.||.||||||||||||||.||
RBAM_006920__ 550 AGCGGCCTTCACAGCAACGGGTTTTCCCTAGTGAGAAAAGTGCTTCTTGA 599
BSNT_01111___ 600 TGA-TGCGGAGCTTGACCTCGATACAACATATGAGCCGTTTGAACGCCCG 648
||| .||||| |||||..|.|||||....|||||.|||||||..||.||.
RBAM_006920__ 600 TGACGGCGGA-CTTGATTTGGATACTGTCTATGAACCGTTTGCGCGTCCT 648
BSNT_01111___ 649 CTTGGCGAGGAGTTGCTTGAACCGACAAGGATTTACGTGAAGCCTGTGCT 698
||.||.||.||.|||||.||||||||.||.||.||.||||||||.|||||
RBAM_006920__ 649 CTCGGAGAAGAATTGCTGGAACCGACGAGAATATATGTGAAGCCGGTGCT 698
BSNT_01111___ 699 TGCCGCGGTCAAAAGCGGAAAAATCGACGGCATGGCGCACGTGACAGGCG 748
....|||||.||||||||.||..|.||||||||||||||.||||||||||
RBAM_006920__ 699 CAAGGCGGTGAAAAGCGGTAAGGTAGACGGCATGGCGCATGTGACAGGCG 748
BSNT_01111___ 749 GAGGATTTATTGAAAATATTCCGCGTATGCTTCCGGAAGGCTTAAGTGCG 798
|||||||.||.||.||.||.|||||.|||||.|||||.||.||.||.|||
RBAM_006920__ 749 GAGGATTCATCGAGAACATCCCGCGGATGCTGCCGGACGGATTGAGCGCG 798
BSNT_01111___ 799 GAAATTGATCATGGCTCATGGCCGATCCCGCCAATTTTTTC-TTTCTTGC 847
|||||||||||.||.|||||||||||||||||.||||||.| |||| |||
RBAM_006920__ 799 GAAATTGATCACGGATCATGGCCGATCCCGCCGATTTTTCCGTTTC-TGC 847
BSNT_01111___ 848 AAGAGTATGGCAAGCTAAAGGAAGAAGACATGTTCAACGTCTTTAATATG 897
|.|||.|.||||||||.||.||||||||.||||||||.||||||||||||
RBAM_006920__ 848 AGGAGCACGGCAAGCTGAAAGAAGAAGAAATGTTCAATGTCTTTAATATG 897
BSNT_01111___ 898 GGTATCGGTTTTGTTTTGGCTGTCAAAGAAGAGCATTTGACAGATGTGAT 947
||.|||||||||||..|.||.||.|||||||||.|.|||||||..||.||
RBAM_006920__ 898 GGCATCGGTTTTGTCCTTGCCGTTAAAGAAGAGGACTTGACAGGCGTTAT 947
BSNT_01111___ 948 CGGAACGCTTGAAAGC-CATGGAGAAAAAGCCTATTTAATCGGGCGTGTG 996
||..||||||| |||| ||.||.||.||.||.|||.|.|||||.||.||.
RBAM_006920__ 948 CGACACGCTTG-AAGCTCAGGGCGAGAAGGCTTATCTGATCGGCCGGGTC 996
BSNT_01111___ 997 AAAAAAGGTGAAGGCGTCACATTCGGCGGTGCGGCACTTTCATGA 1041
||....||.||||||.|..|.||||||||||||||.|||||||||
RBAM_006920__ 997 AAGCGGGGCGAAGGCATTTCTTTCGGCGGTGCGGCTCTTTCATGA 1041
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