Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01109 and RBAM_006910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01109___purF.1.9828.seq
# -bsequence dna-align/RBAM_006910___purF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01109___purF-RBAM_006910___purF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01109___purF-RBAM_006910___purF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01109___purF
# 2: RBAM_006910___purF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1432
# Identity: 1229/1432 (85.8%)
# Similarity: 1229/1432 (85.8%)
# Gaps: 2/1432 ( 0.1%)
# Score: 5321.0
#
#
#=======================================
BSNT_01109___ 1 ATGCTTGCTGAAATCAAAGGCTTAAATGAAGAATGCGGCGTTTTTGGGAT 50
|||||||||||||||||||||.|.||||||||||||||.||.|||||.||
RBAM_006910__ 1 ATGCTTGCTGAAATCAAAGGCCTGAATGAAGAATGCGGTGTGTTTGGCAT 50
BSNT_01109___ 51 TTGGGGACATGAAGAAGCCCCGCAAATCACGTATTACGGTCTCCACAGCC 100
.|||||||||||||||||.|||||.|||||.||||||||.||.|||||||
RBAM_006910__ 51 CTGGGGACATGAAGAAGCTCCGCAGATCACATATTACGGCCTGCACAGCC 100
BSNT_01109___ 101 TTCAGCACCGAGGACAGGAGGGTGCGGGCATCGTAGCGACTGATGGTGAA 150
|.||||||.||||||||||.||.||.||||||||.||||||||.||||||
RBAM_006910__ 101 TCCAGCACAGAGGACAGGAAGGCGCCGGCATCGTGGCGACTGACGGTGAA 150
BSNT_01109___ 151 AAGCTGACGGCTCACAAAGGCCAAGGTCTGATCACTGAAGTATTTCAAAA 200
||.||||||||.||.|||||.||.||.||.||.||.||.||.||||||||
RBAM_006910__ 151 AAACTGACGGCGCATAAAGGACAGGGGCTTATTACCGAGGTTTTTCAAAA 200
BSNT_01109___ 201 CGGCGAACTCAGCAAAGTAAAGGGAAAAGGCGCTATCGGGCACGTTCGGT 250
|||||||||.||||||||.||||||||||||||.|||||||||||.||.|
RBAM_006910__ 201 CGGCGAACTGAGCAAAGTGAAGGGAAAAGGCGCGATCGGGCACGTCCGTT 250
BSNT_01109___ 251 ACGCAACGGCTGGAGGCGGCGGATACGAAAATGTTCAGCCGCTCCTCTTC 300
|.||.|||||.||.||.||||||||.||||||||||||||||||||.|||
RBAM_006910__ 251 ATGCGACGGCAGGCGGAGGCGGATATGAAAATGTTCAGCCGCTCCTGTTC 300
BSNT_01109___ 301 CGTTCCCAAAACAATGGCAGCCTGGCGCTTGCTCATAACGGAAATCTT-G 349
|||||.||||||||.||||||||.|||||.||.||||||||.|| ||| |
RBAM_006910__ 301 CGTTCACAAAACAACGGCAGCCTCGCGCTCGCCCATAACGGCAA-CTTGG 349
BSNT_01109___ 350 TCAACGCCACTCAGCTGAAGCAGCAGCTCGAAAATCAAGGGAGCATCTTT 399
||||||||||.|||.|||||||||||||.|||||.|||||||||||||||
RBAM_006910__ 350 TCAACGCCACACAGTTGAAGCAGCAGCTTGAAAACCAAGGGAGCATCTTT 399
BSNT_01109___ 400 CAAACCTCTTCGGATACAGAGGTTTTGGCTCACCTGATCAAAAGAAGCGG 449
||.||.||.||.|||||.||.||..|||||||.|||||.|||.|.|||||
RBAM_006910__ 400 CAGACTTCCTCCGATACGGAAGTGCTGGCTCATCTGATTAAACGCAGCGG 449
BSNT_01109___ 450 ACACTTCACGCTGAAGGACCAAATTAAAAACTCGCTTTCTATGCTGAAAG 499
||||||..||||||||||.|||||.|||||.||.||.|||||||||||||
RBAM_006910__ 450 ACACTTTTCGCTGAAGGATCAAATCAAAAATTCACTATCTATGCTGAAAG 499
BSNT_01109___ 500 GCGCCTACGCGTTCCTGATCATGACCGAAACAGAAATGATTGTCGCACTT 549
||||.||.||.||..|.||||||||.||||||||||||||.||.||.|||
RBAM_006910__ 500 GCGCTTATGCCTTTTTAATCATGACTGAAACAGAAATGATCGTAGCGCTT 549
BSNT_01109___ 550 GATCCAAACGGGCTGAGACCGCTATCCATCGGCATGATGGGCGACGCTTA 599
||.||.|||||.||.||||||||.||.||||||||||||||.||.|||||
RBAM_006910__ 550 GACCCGAACGGACTCAGACCGCTGTCAATCGGCATGATGGGTGATGCTTA 599
BSNT_01109___ 600 TGTGGTCGCATCAGAAACATGCGCATTTGACGTCGTCGGCGCAACGTACC 649
.||.|||||.||||||||.||||||||.||.||.|||||.||.||.||||
RBAM_006910__ 600 CGTCGTCGCTTCAGAAACGTGCGCATTCGATGTGGTCGGTGCGACATACC 649
BSNT_01109___ 650 TTCGTGAGGTAGAGCCGGGAGAAATGCTGATCATTAATGATGAAGGAATG 699
||||.||||||||||||||.||||||||||||||.|||||||||||.|||
RBAM_006910__ 650 TTCGCGAGGTAGAGCCGGGCGAAATGCTGATCATCAATGATGAAGGCATG 699
BSNT_01109___ 700 AAATCAGAGCGTTTTTCCATGAATATCAACCGTTCCATTTGCAGCATGGA 749
||||||||||||||||||||||||||||||||||||||.|||||||||||
RBAM_006910__ 700 AAATCAGAGCGTTTTTCCATGAATATCAACCGTTCCATCTGCAGCATGGA 749
BSNT_01109___ 750 GTACATTTATTTCTCCAGACCAGACAGCAATATTGACGGTATTAACGTAC 799
|||||||||||||||.|||||.|||||||||||.|||||.||||||||.|
RBAM_006910__ 750 GTACATTTATTTCTCAAGACCTGACAGCAATATCGACGGCATTAACGTGC 799
BSNT_01109___ 800 ACAGTGCCCGTAAAAACCTTGGGAAAATGCTGGCTCAGGAATCCGCAGTT 849
||||.|||||.||||||||.|||||||||||.||.|||||.|||||.|||
RBAM_006910__ 800 ACAGCGCCCGGAAAAACCTCGGGAAAATGCTTGCCCAGGAGTCCGCGGTT 849
BSNT_01109___ 850 GAAGCTGACGTCGTAACCGGGGTTCCGGATTCCAGTATTTCTGCGGCGAT 899
|||||.||.|||||.||.||.||.||.||||||||||||||||||||.||
RBAM_006910__ 850 GAAGCGGATGTCGTCACAGGCGTGCCTGATTCCAGTATTTCTGCGGCCAT 899
BSNT_01109___ 900 CGGCTATGCAGAGGCAACAGGCATTCCGTATGAGCTCGGTTTAATCAAAA 949
|||||||||.||||||||.|||||.|||||.||.||||||.|.||.||||
RBAM_006910__ 900 CGGCTATGCCGAGGCAACGGGCATCCCGTACGAACTCGGTCTCATTAAAA 949
BSNT_01109___ 950 ACCGCTATGTCGGCAGAACGTTTATTCAGCCGTCCCAGGCTCTGCGTGAG 999
||||.||||||||||||||||||||.||||||||.||||||||.||||||
RBAM_006910__ 950 ACCGTTATGTCGGCAGAACGTTTATCCAGCCGTCACAGGCTCTCCGTGAG 999
BSNT_01109___ 1000 CAAGGCGTCAGAATGAAGCTGTCTGCGGTGCGCGGGGTTGTAGAAGGCAA 1049
|||||||||||||||||||||||.||.||.|||||.|||||.|||||.||
RBAM_006910__ 1000 CAAGGCGTCAGAATGAAGCTGTCCGCCGTCCGCGGTGTTGTTGAAGGAAA 1049
BSNT_01109___ 1050 ACGCGTCGTGATGGTGGATGACTCTATCGTGCGCGGAACAACTAGCCGCC 1099
|||.|||||.|||||.|||||.||.|||||||||||.||.||.|||||||
RBAM_006910__ 1050 ACGGGTCGTCATGGTTGATGATTCCATCGTGCGCGGGACGACAAGCCGCC 1099
BSNT_01109___ 1100 GGATTGTCACGATGCTAAGAGAAGCGGGTGCGACAGAGGTGCATGTGAAA 1149
||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_006910__ 1100 GGATTGTCACGATGCTCAGAGAAGCGGGTGCGACAGAGGTGCATGTGAAA 1149
BSNT_01109___ 1150 ATCAGTTCACCGCCGATCGCTCATCCGTGCTTTTACGGCATTGACACTTC 1199
||.|||||||||||||||||||||||||||||.||||||||.|||||.||
RBAM_006910__ 1150 ATTAGTTCACCGCCGATCGCTCATCCGTGCTTCTACGGCATCGACACATC 1199
BSNT_01109___ 1200 CACACATGAAGAACTGATCGCGTCTTCGCATTCTGTTGAAGAAATCCGTC 1249
.||.|||||.||.||||||||.|||||.|||||.||.|||||||||||.|
RBAM_006910__ 1200 AACCCATGAGGAGCTGATCGCTTCTTCTCATTCCGTGGAAGAAATCCGCC 1249
BSNT_01109___ 1250 AGGAAATCGGAGCCGATACCCTCTCATTTTTGAGTGTGGAAGGGCTGCTG 1299
||...|||||.||.||.||.||.||.||.||.|||||.||.||..||.|.
RBAM_006910__ 1250 AGATCATCGGTGCTGACACGCTTTCTTTCTTAAGTGTAGACGGATTGTTA 1299
BSNT_01109___ 1300 AAAGGCATCGGCAGAAAATACGATGACTCGAATTGCGGACAGTGTCTCGC 1349
|||||..|||||.|||.||..||.|||.|.|||||||||||.||.|||||
RBAM_006910__ 1300 AAAGGAGTCGGCCGAACATTTGAAGACACCAATTGCGGACAATGCCTCGC 1349
BSNT_01109___ 1350 TTGCTTTACAGGAAAATATCCGACTGAAATTTACCAGGATACAGTGCTTC 1399
|||.|||||.||.|||||||||||.||||||||.||||||||||||||||
RBAM_006910__ 1350 TTGTTTTACGGGCAAATATCCGACGGAAATTTATCAGGATACAGTGCTTC 1399
BSNT_01109___ 1400 CTCACGTAAAAGAAGCAGTATTAACCAAATAA 1431
||||||||||||||||.||..|.||.||||||
RBAM_006910__ 1400 CTCACGTAAAAGAAGCGGTGCTGACAAAATAA 1431
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