Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01108 and RBAM_006900
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01108___purL.1.9828.seq
# -bsequence dna-align/RBAM_006900___purL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01108___purL-RBAM_006900___purL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01108___purL-RBAM_006900___purL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01108___purL
# 2: RBAM_006900___purL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2230
# Identity: 1932/2230 (86.6%)
# Similarity: 1932/2230 (86.6%)
# Gaps: 2/2230 ( 0.1%)
# Score: 8456.0
#
#
#=======================================
BSNT_01108___ 1 ATGTCACTACTGCTTGAACCAAGTAAAGAACAAATAAAAGAAGAGAAACT 50
|||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_006900__ 1 ATGTCGCTACTGCTTGAACCAAGTAAAGAACAAATAAAAGAAGAGAAACT 50
BSNT_01108___ 51 GTATCAGCAAATGGGTGTCAGTGATGATGAGTTTGCATTGATAGAATCCA 100
.||||||||||||||||||||||||||.|||||.|||.|.||.|||||.|
RBAM_006900__ 51 CTATCAGCAAATGGGTGTCAGTGATGACGAGTTCGCACTCATTGAATCTA 100
BSNT_01108___ 101 TTCTTGGAAGATTGCCGAACTACACAGAAATCGGAATTTTTTCTGTCATG 150
||.|.||||||||||||||||||||.||||||||.||||||||.||||||
RBAM_006900__ 101 TTATCGGAAGATTGCCGAACTACACGGAAATCGGGATTTTTTCCGTCATG 150
BSNT_01108___ 151 TGGTCTGAGCATTGCAGCTATAAAAACTCAAAGCCGATTCTGCGTAAATT 200
|||||.|||||.||||||||||||||||||||.|||.||.|.||.|||||
RBAM_006900__ 151 TGGTCAGAGCACTGCAGCTATAAAAACTCAAAACCGGTTTTACGCAAATT 200
BSNT_01108___ 201 CCCGACAAGCGGCGAGCGTGTGCTGCAGGGGCCGGGGGAAGGCGCCGGAA 250
||||||.||||||||.||.|||||||||||.||.||.||||||||.||||
RBAM_006900__ 201 CCCGACTAGCGGCGAACGCGTGCTGCAGGGTCCCGGAGAAGGCGCGGGAA 250
BSNT_01108___ 251 TCGTTGATATCGGTGATAACCAAGCGGTTGTGTTCAAAATTGAATCACAT 300
|||||||.||||||||.||.||.|||||.|||||||||||||||||.|||
RBAM_006900__ 251 TCGTTGACATCGGTGACAATCAGGCGGTCGTGTTCAAAATTGAATCTCAT 300
BSNT_01108___ 301 AACCACCCATCAGCTCTCGAGCCTTACCAAGGCGCTGCGACTGGCGTAGG 350
|||||.||.|||||..|.|||||.||||||||.||||||||.||.||.||
RBAM_006900__ 301 AACCATCCGTCAGCGATTGAGCCATACCAAGGTGCTGCGACGGGAGTGGG 350
BSNT_01108___ 351 CGGAATTATCCGTGATGTATTCTCAATGGGTGCACGCCCAATCGCTGTAT 400
|||.||.||||||||.||.|||||||||||.||.||.||.||.|||||||
RBAM_006900__ 351 CGGCATCATCCGTGACGTTTTCTCAATGGGCGCCCGTCCGATAGCTGTAT 400
BSNT_01108___ 401 TGAACTCTCTTCGATTTGGTGAACTGACTTCACCACGCGTGAAGTACTTG 450
|.||||||||||||||||||||.||.||||||||.||.||||||||||||
RBAM_006900__ 401 TAAACTCTCTTCGATTTGGTGAGCTCACTTCACCTCGTGTGAAGTACTTG 450
BSNT_01108___ 451 TTTGAAGAAGTAGTAGCGGGTATCGCCGGATACGGCAACTGTATCGGCAT 500
||||||||||||||.|||||.|||||.||||||||.||||||||||||||
RBAM_006900__ 451 TTTGAAGAAGTAGTGGCGGGAATCGCGGGATACGGAAACTGTATCGGCAT 500
BSNT_01108___ 501 CCCCACAGTCGGCGGAGAAGTGCAGTTTGACAGC-AGCTATGAAGGAAAT 549
.||.||.|||||||||||||||||||||||| || ||||||||.||.|||
RBAM_006900__ 501 TCCGACGGTCGGCGGAGAAGTGCAGTTTGAC-GCAAGCTATGAGGGCAAT 549
BSNT_01108___ 550 CCGCTCGTCAACGCAATGTGCGTCGGTTTAATCAATCATGAAGACATCAA 599
|||||.|||||.||||||||||||||.|||||..|||||.||||.||.||
RBAM_006900__ 550 CCGCTTGTCAATGCAATGTGCGTCGGCTTAATTGATCATAAAGATATTAA 599
BSNT_01108___ 600 AAAAGGCCAGGCAAAAGGTGTCGGCAACACAGTAATGTACGTAGGAGCGA 649
||||||||||||.|||||||||||||||||.||.||||||||.||.||.|
RBAM_006900__ 600 AAAAGGCCAGGCGAAAGGTGTCGGCAACACGGTCATGTACGTCGGCGCTA 649
BSNT_01108___ 650 AAACTGGGCGTGACGGCATCCACGGCGCTACGTTTGCTTCTGAAGAAATG 699
||||.||.||.||||||||.|||||||||||.||.||.||.|||||||||
RBAM_006900__ 650 AAACGGGCCGCGACGGCATACACGGCGCTACTTTCGCATCAGAAGAAATG 699
BSNT_01108___ 700 TCAGACTCGTCTGAAGAAAAGCGTTCTGCTGTCCAAGTCGGCGATCCGTT 749
|||||.||.|||||||||||.|||||.||.||.||.|||||||||||.||
RBAM_006900__ 700 TCAGATTCATCTGAAGAAAAACGTTCCGCGGTGCAGGTCGGCGATCCTTT 749
BSNT_01108___ 750 TATGGAGAAGCTTTTGCTTGAAGCATGTCTGGAAGTCATCCAATGCGACG 799
.|||||.||.|||.|.||.||||||||.||.|||||||||||||||||||
RBAM_006900__ 750 CATGGAAAAACTTCTCCTGGAAGCATGCCTTGAAGTCATCCAATGCGACG 799
BSNT_01108___ 800 CCTTAGTCGGCATTCAGGATATGGGAGCTGCCGGTTTAACAAGCTCAAGT 849
|||||||||||||||||||||||||.||.||.|||.|.|||||.||.|||
RBAM_006900__ 800 CCTTAGTCGGCATTCAGGATATGGGGGCGGCAGGTCTGACAAGTTCGAGT 849
BSNT_01108___ 850 GCAGAAATGGCAAGTAAAGCCGGTTCTGGCATTGAAATGAACCTTGACCT 899
||.|||||||||||.||||||||.||.||||||||||||||||||||.||
RBAM_006900__ 850 GCTGAAATGGCAAGCAAAGCCGGCTCAGGCATTGAAATGAACCTTGATCT 899
BSNT_01108___ 900 GATTCCTCAGCGCGAAACAGGCATGACCGCGTATGAAATGATGCTTTCTG 949
.|||||.|||||.||||||||.||||||||.||.||||||||||||||.|
RBAM_006900__ 900 CATTCCGCAGCGGGAAACAGGTATGACCGCTTACGAAATGATGCTTTCCG 949
BSNT_01108___ 950 AATCACAAGAACGGATGCTTTTGGTTATTGAGCGCGGACGTGAGCAGGAA 999
|.||.||.|||||.||||||.|.||.|||||.|||||||||||.||||||
RBAM_006900__ 950 AGTCTCAGGAACGCATGCTTCTCGTCATTGAACGCGGACGTGAACAGGAA 999
BSNT_01108___ 1000 ATCATCGATATTTTTGACAAGTACGATCTTGAAGCGGTTTCTGTCGGACA 1049
||..|||||||||||||.||.||.|||||||||||||||||.||.||.||
RBAM_006900__ 1000 ATTGTCGATATTTTTGATAAATATGATCTTGAAGCGGTTTCCGTAGGTCA 1049
BSNT_01108___ 1050 TGTGACAGATGATAAAATGCTTCGCCTGACACACAAAGGAGAGGTTGTGT 1099
|||.||.||||||||||||||.|||||....||.||.|||||||||||.|
RBAM_006900__ 1050 TGTTACGGATGATAAAATGCTCCGCCTCCGCCATAACGGAGAGGTTGTTT 1099
BSNT_01108___ 1100 GCGAGCTGCCTGTTGATGCCTTGGCAGAAGAAGCACCGGTTTACCATAAG 1149
|||||||.||.||.||.||..||||.|||||||||||.||.|||||.|||
RBAM_006900__ 1100 GCGAGCTTCCGGTCGACGCGCTGGCGGAAGAAGCACCTGTATACCACAAG 1149
BSNT_01108___ 1150 CCTTCTCAAGAGCCTGCTTACTATCGCGAGTTTTTGGAAACGGACGTTCA 1199
||.||...|||.||.||.|||||.|||||||||..|||||||||.|.||.
RBAM_006900__ 1150 CCGTCAGCAGAACCCGCGTACTACCGCGAGTTTCAGGAAACGGAAGCTCC 1199
BSNT_01108___ 1200 GGCTCCGCAAATTGAAGATGCGAATGAAACGCTGAAGGCCCTTCTTCAGC 1249
.||.||..||.|..|||||||||..||.|||||....|||||.||.||||
RBAM_006900__ 1200 CGCGCCTGAAGTAAAAGATGCGACAGAGACGCTTTTTGCCCTGCTGCAGC 1249
BSNT_01108___ 1250 AGCCGACGATTGCGAGTAAAGAGTGGGTGTATGATCAGTATGACTACATG 1299
|||||||.||.||.||.||||||||||||||.|||||.||||||||||||
RBAM_006900__ 1250 AGCCGACAATCGCCAGCAAAGAGTGGGTGTACGATCAATATGACTACATG 1299
BSNT_01108___ 1300 GTGCGCACGAATACAGTTGTCGCTCCTGGGTCTGATGCTGGTGTTCTCAG 1349
||||||||.|||||.||.||||||||.||.|||||.||.||.||.|||||
RBAM_006900__ 1300 GTGCGCACAAATACGGTGGTCGCTCCGGGCTCTGACGCGGGAGTGCTCAG 1349
BSNT_01108___ 1350 AATCCGCGGAACGAAAAAGGCGCTGGCGATGACGACAGACTGTAACGCGC 1399
|||||||||.||||||||.|||||||||||||||||.||.||||||||.|
RBAM_006900__ 1350 AATCCGCGGCACGAAAAAAGCGCTGGCGATGACGACGGATTGTAACGCCC 1399
BSNT_01108___ 1400 GTTATCTCTATCTTGATCCTGAAGTCGGAGGGAAAATTGCTGTCGCTGAA 1449
|||||.|.|||||||||||.||||..||.||.|||||.||.||.||.|||
RBAM_006900__ 1400 GTTATTTATATCTTGATCCAGAAGAAGGCGGAAAAATCGCCGTTGCCGAA 1449
BSNT_01108___ 1450 GCAGCGCGCAACATCATTTGCTCAGGCGCAGAACCGCTTGCGGTCACAGA 1499
||.||||||||||||.|.|||||.|||||.|||||||||||||||||.||
RBAM_006900__ 1450 GCGGCGCGCAACATCGTATGCTCCGGCGCCGAACCGCTTGCGGTCACGGA 1499
BSNT_01108___ 1500 TAACCTTAACTTCGGAAACCCGGAGAAGCCGGAAATCTTCTGGCAGATCG 1549
|||.||.||.||||||||||||||.||.||.|||||.|||||||||||||
RBAM_006900__ 1500 TAATCTGAATTTCGGAAACCCGGAAAAACCTGAAATTTTCTGGCAGATCG 1549
BSNT_01108___ 1550 AAAAAGCGGCAGACGGCATAAGCGAAGCGTGCAATGTTCTCAGCACTCCG 1599
||||||||||.||||||||.|||||.||||||||||||||||||||.||.
RBAM_006900__ 1550 AAAAAGCGGCCGACGGCATCAGCGAGGCGTGCAATGTTCTCAGCACACCC 1599
BSNT_01108___ 1600 GTTATCGGCGGTAACGTATCGCTTTATAACGAATCAAACGGCACGGCGAT 1649
||.||||||||.||||||||.||||||||.|||||.|||||.||||||||
RBAM_006900__ 1600 GTCATCGGCGGAAACGTATCACTTTATAATGAATCGAACGGAACGGCGAT 1649
BSNT_01108___ 1650 CTATCCGACACCAGTTATCGGCATGGTCGGCCTAATTGAAGATACAGCGC 1699
|||.|||||.||.||||||||||||||||||.|||||||||||||.||.|
RBAM_006900__ 1650 CTACCCGACGCCTGTTATCGGCATGGTCGGCTTAATTGAAGATACCGCTC 1699
BSNT_01108___ 1700 ACATTACAACACAGCATTTCAAACAAGCAGGAGATCTCGTATACGTGATC 1749
|.|||||.||||||||||||||||||||.||.|||||.||||||||||||
RBAM_006900__ 1700 ATATTACGACACAGCATTTCAAACAAGCGGGGGATCTTGTATACGTGATC 1749
BSNT_01108___ 1750 GGCGAAACAAAACCAGAGTTTGCGGGAAGCGAGCTGCAAAAAATGACAGA 1799
||||||||||||||.||||||||.||||||||.|||||||||||||||||
RBAM_006900__ 1750 GGCGAAACAAAACCTGAGTTTGCCGGAAGCGAACTGCAAAAAATGACAGA 1799
BSNT_01108___ 1800 AGGCCGCATTTACGGCAAAGCGCCGCAAATCGATCTTGATGTAGAGCTGT 1849
||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_006900__ 1800 AGGCCGCATTTACGGCAAAGCGCCGCAAATCGATCTTGATATAGAGCTGT 1849
BSNT_01108___ 1850 CTCGTCAAAAAGCACTGCTTGACGCGATTAAAAAAGGCTTCGTTCAATCT 1899
|.||.|||||||||.||||||||||||||||||||||||||||||||||.
RBAM_006900__ 1850 CACGCCAAAAAGCATTGCTTGACGCGATTAAAAAAGGCTTCGTTCAATCA 1899
BSNT_01108___ 1900 GCGCATGATGTGTCTGAAGGCGGCTTAGGCGTAGCGATTGCGGAAAGTGT 1949
||||||||.||.||.||||||||||||||||||||||||||.|||||.||
RBAM_006900__ 1900 GCGCATGACGTATCAGAAGGCGGCTTAGGCGTAGCGATTGCAGAAAGCGT 1949
BSNT_01108___ 1950 CATGACGACGGAAAACCTTGGCGCTAATGTGACTGTAGAAGGGGAAGCGG 1999
||||||||||||||||||||||||.||.||||||||||||||||||||||
RBAM_006900__ 1950 CATGACGACGGAAAACCTTGGCGCCAACGTGACTGTAGAAGGGGAAGCGG 1999
BSNT_01108___ 2000 CGTTATTATTCTCTGAATCTCAATCCCGCTTCGTCGTTTCAGTGAAAAAA 2049
|.||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_006900__ 2000 CATTATTATTCTCTGAATCTCAATCCCGCTTCGTCGTTTCGGTGAAAAAA 2049
BSNT_01108___ 2050 GAACATCAAGCTGCGTTTGAAGCAACTGTCAAAGATGCGGTTCATATTGG 2099
|||||.|||||.|||||||||||..||||....||||||||||||||.||
RBAM_006900__ 2050 GAACACCAAGCGGCGTTTGAAGCGGCTGTGGCCGATGCGGTTCATATCGG 2099
BSNT_01108___ 2100 TGAGGTAACAGCTGACGGAATTCTGGCGATTCAAAACCAAGACGGACAAC 2149
.||||||||.|||||||||.|||||||||||||||||||.||||||||||
RBAM_006900__ 2100 CGAGGTAACGGCTGACGGACTTCTGGCGATTCAAAACCAGGACGGACAAC 2149
BSNT_01108___ 2150 AAATGATTCATGCGCAAACGAAAGAGCTTGAACGCGTATGGAAAGGAGCT 2199
||.||.||||.||||||||||||||.||.||.||||..||||||||||||
RBAM_006900__ 2150 AATTGGTTCACGCGCAAACGAAAGAACTAGAGCGCGCGTGGAAAGGAGCT 2199
BSNT_01108___ 2200 ATCCCATGCTTGCTGAAATCAAAGGCTTAA 2229
||.|||||||||||||||||||||||.|.|
RBAM_006900__ 2200 ATTCCATGCTTGCTGAAATCAAAGGCCTGA 2229
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