Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01107 and RBAM_006890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01107___purQ.1.9828.seq
# -bsequence dna-align/RBAM_006890___purQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01107___purQ-RBAM_006890___purQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01107___purQ-RBAM_006890___purQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01107___purQ
# 2: RBAM_006890___purQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 684
# Identity: 594/684 (86.8%)
# Similarity: 594/684 (86.8%)
# Gaps: 0/684 ( 0.0%)
# Score: 2610.0
#
#
#=======================================
BSNT_01107___ 1 GTGAAATTTGCGGTGATTGTGTTACCCGGCTCCAACTGTGATATCGATAT 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_006890__ 1 GTGAAATTTGCGGTGATTGTGTTACCCGGCTCCAACTGTGATATTGATAT 50
BSNT_01107___ 51 GTATCATGCTGTAAAGGATGAGCTCGGCCATGAAGTGGAATACGTCTGGC 100
||..||.||.|||||.||.||.||||||.|.|||||.||.||.|||||||
RBAM_006890__ 51 GTTCCACGCCGTAAAAGACGAACTCGGCGAAGAAGTCGAGTATGTCTGGC 100
BSNT_01107___ 101 ATGAGGAAACAAGTCTTGACGGCTTCGACGGCGTGTTAATTCCGGGAGGA 150
|.|||||||||||.||||||||.||.|||||||||.|.||.||.||.||.
RBAM_006890__ 101 ACGAGGAAACAAGCCTTGACGGATTTGACGGCGTGCTCATCCCCGGCGGG 150
BSNT_01107___ 151 TTTTCTTACGGCGATTACTTAAGATGCGGTGCCATCGCCCGATTTGCGAA 200
|||||.||||||||.|||||.||||||||.|||||||||.||||.||.||
RBAM_006890__ 151 TTTTCATACGGCGACTACTTGAGATGCGGCGCCATCGCCAGATTCGCAAA 200
BSNT_01107___ 201 TATTATGCCAGCTGTCAAACAAGCAGCGGCTGAAGGAAAACCTGTTCTTG 250
|||.|||||.|||||.|||.||||.||.||.|||||||||||.|||||.|
RBAM_006890__ 201 TATCATGCCGGCTGTGAAAAAAGCGGCTGCCGAAGGAAAACCGGTTCTCG 250
BSNT_01107___ 251 GCGTCTGTAACGGATTCCAGATTTTACAGGAGCTTGGGCTGCTGCCAGGC 300
|||||||.|||||||||||||||.|.||||||||.||.||.|||||.|||
RBAM_006890__ 251 GCGTCTGCAACGGATTCCAGATTCTGCAGGAGCTCGGACTTCTGCCCGGC 300
BSNT_01107___ 301 GCAATGAGACGCAACAAAGATCTGAAGTTCATTTGCCGTCCGGTTGAATT 350
||.||||||||||||||||||.|.||||||||.|||||.|||||||||||
RBAM_006890__ 301 GCGATGAGACGCAACAAAGATTTAAAGTTCATCTGCCGCCCGGTTGAATT 350
BSNT_01107___ 351 GATTGTTCAGAACGACGAAACCTTATTCACAGCTTCCTACGAAAAGGGAG 400
.||.||.|||||||.||..||.|||||||||.|||||||.|||||.|||.
RBAM_006890__ 351 AATCGTGCAGAACGGCGGCACGTTATTCACATCTTCCTATGAAAAAGGAC 400
BSNT_01107___ 401 AATCGATTACAATCCCGGTTGCCCATGGTGAAGGGAATTTCTACTGTGAT 450
||||||||||.||.|||||||||||.||.|||||.|||||||||||||||
RBAM_006890__ 401 AATCGATTACGATTCCGGTTGCCCACGGCGAAGGCAATTTCTACTGTGAT 450
BSNT_01107___ 451 GACGAGACGCTTGCTACATTAAAGGAAAACAATCAAATTGCTTTCACATA 500
|||||.|||||||..|.||||||.||||||||||||||.||.||||||||
RBAM_006890__ 451 GACGAAACGCTTGAAAGATTAAAAGAAAACAATCAAATCGCCTTCACATA 500
BSNT_01107___ 501 CGGCTCTAATATTAATGGAAGTGTCAGCGACATTGCCGGTGTCGTGAATG 550
||||....|||||||.|||||.|||||||.|||||||||.||||||||||
RBAM_006890__ 501 CGGCGGCGATATTAACGGAAGCGTCAGCGGCATTGCCGGCGTCGTGAATG 550
BSNT_01107___ 551 AGAAAGGCAATGTATTAGGCATGATGCCTCACCCTGAGCGCGCGGTCGAT 600
||||||||||.||||||||||||||||||||||||||||||||.||||||
RBAM_006890__ 551 AGAAAGGCAACGTATTAGGCATGATGCCTCACCCTGAGCGCGCAGTCGAT 600
BSNT_01107___ 601 GAACTGCTTGGAAGCGCCGACGGTCTTAAATTGTTCCAGTCTATCGTGAA 650
||||||||.||.|||||.||||||||||.||||||||.||||||||||||
RBAM_006890__ 601 GAACTGCTCGGCAGCGCAGACGGTCTTACATTGTTCCGGTCTATCGTGAA 650
BSNT_01107___ 651 AAATTGGAGGGAAACTCATGTCACTACTGCTTGA 684
||||||||||||||||||||||.|||||||||||
RBAM_006890__ 651 AAATTGGAGGGAAACTCATGTCGCTACTGCTTGA 684
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