Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01106 and RBAM_006880

See Amino acid alignment / Visit BSNT_01106 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence dna-align/BSNT_01106___purS.1.9828.seq
#    -bsequence dna-align/RBAM_006880___purS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01106___purS-RBAM_006880___purS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01106___purS-RBAM_006880___purS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01106___purS
# 2: RBAM_006880___purS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     224/255 (87.8%)
# Similarity:   224/255 (87.8%)
# Gaps:           0/255 ( 0.0%)
# Score: 996.0
# 
#
#=======================================

BSNT_01106___      1 ATGTATAAAGTAAAAGTTTATGTCAGCTTAAAAGAAAGTGTACTAGATCC     50
                     |||||||||||.|||||||||||||||||||||||||||||.||.|||||
RBAM_006880__      1 ATGTATAAAGTGAAAGTTTATGTCAGCTTAAAAGAAAGTGTGCTCGATCC     50

BSNT_01106___     51 ACAAGGGAGCGCTGTCCAGCATGCCTTGCACAGTATGACTTATAACGAAG    100
                     .|||||.|||||.||.||||||||.||||||||.|||||.||.||.||||
RBAM_006880__     51 TCAAGGAAGCGCGGTGCAGCATGCATTGCACAGCATGACCTACAATGAAG    100

BSNT_01106___    101 TTCAAGATGTGCGCATCGGGAAATACATGGAGCTTACCATTGAAAAATCT    150
                     |.||.||||||||||||||.||||||||||||||.||.||||||||||||
RBAM_006880__    101 TGCAGGATGTGCGCATCGGAAAATACATGGAGCTGACGATTGAAAAATCT    150

BSNT_01106___    151 GACCGTGATCTTGACGTGCTAGTGAAAGAAATGTGCGAAAAACTTCTTGC    200
                     |||||.||||||||||.|||.||||||||||||||.|||||.||.|||||
RBAM_006880__    151 GACCGCGATCTTGACGCGCTCGTGAAAGAAATGTGTGAAAAGCTCCTTGC    200

BSNT_01106___    201 GAACACAGTGATTGAAGATTACAGATACGAGGTTGAGGAGGTAGTCGCAC    250
                     .||.|||||.||||||||.|||.||||.||.|||||||||||.|||||||
RBAM_006880__    201 CAATACAGTCATTGAAGACTACCGATATGAAGTTGAGGAGGTTGTCGCAC    250

BSNT_01106___    251 AGTGA    255
                     |||||
RBAM_006880__    251 AGTGA    255


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