Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01104 and RBAM_006860
See
Amino acid alignment /
Visit
BSNT_01104 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01104___purB.1.9828.seq
# -bsequence dna-align/RBAM_006860___purB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01104___purB-RBAM_006860___purB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01104___purB-RBAM_006860___purB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01104___purB
# 2: RBAM_006860___purB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity: 1107/1296 (85.4%)
# Similarity: 1107/1296 (85.4%)
# Gaps: 3/1296 ( 0.2%)
# Score: 4780.0
#
#
#=======================================
BSNT_01104___ 1 ATGATCGAACGTTATTCAAGACCTGAAATGTCCGCGATTTGGACGGATGA 50
||||||||||||||||||||||||||||||||||||||.||||||||.||
RBAM_006860__ 1 ATGATCGAACGTTATTCAAGACCTGAAATGTCCGCGATCTGGACGGACGA 50
BSNT_01104___ 51 AAACAGATTTCAAGCATGGCTGGAGGTAGAGATTCTTGCCTGTGAAGCGT 100
||||||||..||.|||||||||||.||.||||||.|.|||||||||||.|
RBAM_006860__ 51 AAACAGATACCAGGCATGGCTGGAAGTCGAGATTTTAGCCTGTGAAGCCT 100
BSNT_01104___ 101 GGGCGGAGCTTGGCGTCATTCCGAAAGAAGATGTAAAAGTTATGCGTGAG 150
||||.||||||||||||||||||||||||||.||.|||||.||||||||.
RBAM_006860__ 101 GGGCTGAGCTTGGCGTCATTCCGAAAGAAGACGTCAAAGTCATGCGTGAA 150
BSNT_01104___ 151 AACGCATCATTTGACATCAACCGCATTTTAGAAATCGAAAAGGACACGCG 200
|||||.||.||.|||||||||||||||||.||||||||..||||.|||||
RBAM_006860__ 151 AACGCGTCTTTCGACATCAACCGCATTTTGGAAATCGAGCAGGATACGCG 200
BSNT_01104___ 201 CCATGACGTTGTCGCTTTTACGCGCGCCGTTTCCGAATCACTGGGCGAAG 250
|||||||||.||.||.||.||.|||||.|||||.||||||.|.|||||||
RBAM_006860__ 201 CCATGACGTCGTTGCATTCACCCGCGCGGTTTCAGAATCATTAGGCGAAG 250
BSNT_01104___ 251 AAAGAAAATGGGTGCACTACGGATTAACGTCAACTGACGTTGTTGATACG 300
|||||||||||||.||||||||..|.||||||||.||.||.||.|||||.
RBAM_006860__ 251 AAAGAAAATGGGTTCACTACGGCCTGACGTCAACAGATGTCGTGGATACC 300
BSNT_01104___ 301 GCTCTTTCCTACTTATTAAAACAGGCAAACGATATTTTGCTCAAGGATCT 350
|||||||||||..|||||||||||||.||.||.||.|||||||||||..|
RBAM_006860__ 301 GCTCTTTCCTATCTATTAAAACAGGCGAATGAGATCTTGCTCAAGGACAT 350
BSNT_01104___ 351 TGAGAGATTTGTTGACATTATTAAAGAAAAAGCGAAAGAACATAAATACA 400
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_006860__ 351 TGAGAGATTTGTTGACATTATAAAAGAAAAAGCGAAAGAACATAAATACA 400
BSNT_01104___ 401 CAGTCATGATGGGGCGCACGCACGGCGTACACGCTGAGCCTACAACTTTC 450
|.|||||||||||.||||||||||||||||||||.||.||.||.||.|||
RBAM_006860__ 401 CGGTCATGATGGGCCGCACGCACGGCGTACACGCGGAACCGACGACATTC 450
BSNT_01104___ 451 GGCTTAAAACTTGCGCTTTGGCATGAAGAAATGAAACGTAATCTTGAGCG 500
|||.|.|||||.||||||||||||||||||||||||||.||.|||||.||
RBAM_006860__ 451 GGCCTGAAACTCGCGCTTTGGCATGAAGAAATGAAACGCAACCTTGAACG 500
BSNT_01104___ 501 CTTCAAACAAGCGAAAGCAGGCATCGAGGTTGGAAAGATTTCCGGCGCTG 550
.|||||.||.||.||||.|||.|||||.||.||.|||.||||||||||.|
RBAM_006860__ 501 TTTCAAGCAGGCAAAAGAAGGGATCGAAGTCGGGAAGCTTTCCGGCGCGG 550
BSNT_01104___ 551 TCGGCACATATGCGAACATTGATCCATTTGTTGAACAATATGTCTGTGAG 600
||||||||||||||||.||||||||.||.||.|||||.|||||||||||.
RBAM_006860__ 551 TCGGCACATATGCGAATATTGATCCGTTCGTAGAACAGTATGTCTGTGAA 600
BSNT_01104___ 601 AAGCTCGGATTGAAAGCAGCACCGATTTCCACTCAAACCCTTCAGCGTGA 650
||.|||||..|||||||.||.||||||||||||||.||..|.|||||.||
RBAM_006860__ 601 AAACTCGGCCTGAAAGCGGCGCCGATTTCCACTCAGACATTACAGCGCGA 650
BSNT_01104___ 651 CCGCCATGCTGACTATATGGCAACACTTGCTTTGATCGCGACAAGCATCG 700
|||.|||||.||.||.|||||..||||.||||||||||||||.|||||.|
RBAM_006860__ 651 CCGTCATGCGGATTACATGGCGGCACTGGCTTTGATCGCGACGAGCATTG 700
BSNT_01104___ 701 AGAAATTCGCTGTGGAAATCCGCGGACTGCAAAAGAGTGAAACACGTGAA 750
|.||||||||.||||||||||||||.||||||||||||||||||||||||
RBAM_006860__ 701 AAAAATTCGCAGTGGAAATCCGCGGTCTGCAAAAGAGTGAAACACGTGAA 750
BSNT_01104___ 751 GTTGAGGAATTTTTCGCGAAAGGGCAAAAGGGTTCATCTGCAATGCCGCA 800
||.||.||.|||||.||.|||||.|||||.||.|||||.||.|||||.||
RBAM_006860__ 751 GTGGAAGAGTTTTTTGCTAAAGGACAAAAAGGCTCATCGGCTATGCCTCA 800
BSNT_01104___ 801 TAAACGAAATCCGATTGGCTCTGAAAACATGACAGGCATGGCGCGCGTGA 850
|||.||.||||||||.||.||.|||||.|||||.||||||||||||||||
RBAM_006860__ 801 TAAGCGGAATCCGATCGGGTCGGAAAATATGACGGGCATGGCGCGCGTGA 850
BSNT_01104___ 851 TCCGCGGCTACATGATGACAGCTTACGAAAATGTTCCATTATGGCATGAG 900
|||||||.||.|||.||||.||.|||||||||||.||.||||||||||||
RBAM_006860__ 851 TCCGCGGGTATATGCTGACGGCATACGAAAATGTACCGTTATGGCATGAG 900
BSNT_01104___ 901 CGCGATATTTCTCATTCTTCAGCAGAACGGATTATTCTTCCGGATGCGAC 950
||.||||||||||||||.|||||.||.||.||.||||||||.||.|||||
RBAM_006860__ 901 CGTGATATTTCTCATTCATCAGCTGAGCGCATCATTCTTCCTGACGCGAC 950
BSNT_01104___ 951 AATTGCGCTGAACTACATGCTGAACCGCTTCTCCAACATCGTGAAGAACT 1000
|||.|||||.||.||||||||||||||.|||..|||.|||||.||.||||
RBAM_006860__ 951 AATCGCGCTAAATTACATGCTGAACCGATTCAGCAATATCGTCAAAAACT 1000
BSNT_01104___ 1001 TAACGGTCTTCCCGGAAAACATGAAGCGCAACATGGACCGCACTCTCGGC 1050
|||||||.|||||||||||.|||||.|||||||||||||||||.|||||.
RBAM_006860__ 1001 TAACGGTATTCCCGGAAAATATGAAACGCAACATGGACCGCACACTCGGT 1050
BSNT_01104___ 1051 CTTATCTATTCTCAGCGTGTGCTGCTTGCTTTGATTGACACAGGCCTTAC 1100
.|.|||||||||||.||.||||||||||||||.||.|||||.||.||..|
RBAM_006860__ 1051 TTGATCTATTCTCAACGCGTGCTGCTTGCTTTAATCGACACGGGTCTGCC 1100
BSNT_01104___ 1101 ACGTGAAGAAGCCTATGATACTGTTCAGCCGAAAGCAATGGAAGCGTGGG 1150
.|||||||||||.|||||.||.||||||||||||||.||||||||.||||
RBAM_006860__ 1101 TCGTGAAGAAGCATATGACACGGTTCAGCCGAAAGCGATGGAAGCATGGG 1150
BSNT_01104___ 1151 AAAAACAAGTGCCGTTCCGCGAACTTGTTGAAGCGGAAGAGAAAATCACG 1200
||||||||||||||||||||.|.|||||.||||||||.||.|||||||||
RBAM_006860__ 1151 AAAAACAAGTGCCGTTCCGCCAGCTTGTCGAAGCGGAGGAAAAAATCACG 1200
BSNT_01104___ 1201 TCACGTCTTTCTCCAGAAAAAATTGCTGACTGCTTTGATTACAATTACCA 1250
||.|||||..|.||.|||.|.|||||.||.||||||||.||||||||.||
RBAM_006860__ 1201 TCCCGTCTCACACCGGAACAGATTGCCGATTGCTTTGACTACAATTATCA 1250
BSNT_01104___ 1251 TCTGAAAAATGTTGATCTGATCTTTGAACGTTTAGGTTTAGCATAG 1296
|.|||||||.||.||..||||||||||.||||||||||| ||||
RBAM_006860__ 1251 TTTGAAAAACGTCGACTTGATCTTTGAGCGTTTAGGTTT---ATAG 1293
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.