Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01103 and RBAM_006850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01103___purK.1.9828.seq
# -bsequence dna-align/RBAM_006850___purK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01103___purK-RBAM_006850___purK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01103___purK-RBAM_006850___purK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01103___purK
# 2: RBAM_006850___purK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1197
# Identity: 902/1197 (75.4%)
# Similarity: 902/1197 (75.4%)
# Gaps: 69/1197 ( 5.8%)
# Score: 3488.0
#
#
#=======================================
BSNT_01103___ 1 ---------------------------------------TTGTC---TAA 8
||||| |||
RBAM_006850__ 1 ATGCGACAAAACAAACGGTGCTGGAAAGCAGTGATCAGCTTGTCTAATAA 50
BSNT_01103___ 9 ACAAATCATCTATCCGGGAGCTGTAATCGGCATTATCGGCGGCGGCCAGC 58
|.|||..||.|.|||.||.||.||.||||||||||||||.|||||.||||
RBAM_006850__ 51 AAAAACGATTTTTCCCGGCGCCGTCATCGGCATTATCGGAGGCGGACAGC 100
BSNT_01103___ 59 TTGGGAAAATGATGGCTGTGTCCGCCAAACAAATGGGGTATAAAGTCGCG 108
|.||.||||||||||||||..||||.|||||.|||||.|||||||||||.
RBAM_006850__ 101 TCGGAAAAATGATGGCTGTCGCCGCAAAACAGATGGGCTATAAAGTCGCT 150
BSNT_01103___ 109 GTCGTTGATCCGGTGAAAGATTCGCCGTGCGGGCAGGTTGCGGATGTCGA 158
|||||.|||||.||||||||.|||||.|||||.|||.|.||.|||.|.||
RBAM_006850__ 151 GTCGTCGATCCCGTGAAAGACTCGCCATGCGGACAGATCGCCGATATTGA 200
BSNT_01103___ 159 AATTACCGCTCATTATAATGACCGTGAAGCGATTCGAAAATTGGCTGAAA 208
.||||||||.||.||.|||||||||||||||||||.|||||||||.|.|.
RBAM_006850__ 201 GATTACCGCCCAGTACAATGACCGTGAAGCGATTCAAAAATTGGCCGGAG 250
BSNT_01103___ 209 TCAGCGATATCATCACATATGAGTTTGAAAACATCGACTATGATGCGCTG 258
||||.||.|||||.||.||.||.||||||||.|||||.||.||.|||||.
RBAM_006850__ 251 TCAGTGACATCATTACCTACGAATTTGAAAATATCGATTACGAGGCGCTC 300
BSNT_01103___ 259 CATTGGCTGAAAGATCATGCGTATCTCCCGCAAGGAAGTGAGCTGCTGCT 308
.|.|||||.|||||.|||||.|||||.||.||.|||||.|||||||||||
RBAM_006850__ 301 AACTGGCTCAAAGAACATGCATATCTTCCCCAGGGAAGCGAGCTGCTGCT 350
BSNT_01103___ 309 CATTACCCAAAACCGTGAAACAGAGAAAAAAGCAATTCAATCCGCGGGCT 358
|||.|||||||||.|.|||||.||.|||||.||.||.|||||.||.||||
RBAM_006850__ 351 CATCACCCAAAACAGGGAAACGGAAAAAAAGGCGATCCAATCAGCAGGCT 400
BSNT_01103___ 359 GTGAAGTCGCACCGTACAGCATCGTCAAAACA--------AAGAATGAAT 400
||.|||||||.|||||..|.||||| ||||| .||..|||
RBAM_006850__ 401 GTCAAGTCGCGCCGTATCGGATCGT--AAACAGCGGACGGGAGCTTGA-- 446
BSNT_01103___ 401 TGAAACAGGCGGTACAAGAGCTCGGGTTACCCGCAGTTCTGAAGACATGC 450
|.|| ||.||.||.|..||.|||.|.||.||.||.|||||.||||||
RBAM_006850__ 447 -GGAA---GCCGTTCAGGCACTGGGGCTCCCGGCGGTGCTGAAAACATGC 492
BSNT_01103___ 451 CGCGGCGGGTACGACGGCAAAGGCCAATTTGTGATAAAAGAAGAGGCGCA 500
||||||||.||.||||||||||||||||||||.||.||.|||||.|..||
RBAM_006850__ 493 CGCGGCGGATATGACGGCAAAGGCCAATTTGTCATTAAGGAAGAAGGACA 542
BSNT_01103___ 501 AATGGAGCAGGCAGCCGCTCTGTTAGAACACGGAACTTGCATTCTTGAAA 550
.|..||..|.||.||.||.|||||||||.||||.||.|||||.|||||||
RBAM_006850__ 543 GACAGATGAAGCGGCTGCGCTGTTAGAAAACGGCACGTGCATACTTGAAA 592
BSNT_01103___ 551 GCTGGGTTTCTTTTAAAATGGAACTGTCGGTGATCGT--CGTCAGATCGG 598
|||||||.||.||....|||||.||.||.||.||||| || |||||||
RBAM_006850__ 593 GCTGGGTATCGTTCCGGATGGAGCTTTCCGTTATCGTGACG--AGATCGG 640
BSNT_01103___ 599 TAAACGGTGAAATTTCAACGTTTCCGACAGCTGAAAACATTCACCACAAC 648
|..|||||||.||||||||.||||||.|.||||||||.||.|||.|.||.
RBAM_006850__ 641 TGCACGGTGAGATTTCAACCTTTCCGGCTGCTGAAAATATCCACAAAAAT 690
BSNT_01103___ 649 AATATTCTTTTCCAAAGCATCGTGCCCGCACGGGTAGA-GAAAGGGATTC 697
||||||||.||||||||||||||||||||..|.|..|| ||||.|| |||
RBAM_006850__ 691 AATATTCTGTTCCAAAGCATCGTGCCCGCGAGAGCGGAGGAAACGG-TTC 739
BSNT_01103___ 698 AGCAGAAGGCTGCTGATCTCGCGGTTAAGCTTGCAGATGAGCTT-AACCT 746
||.||..|||.|..|..||.||.|||.||||.||.|| ||..|| .|.||
RBAM_006850__ 740 AGAAGCGGGCAGAGGCGCTTGCCGTTCAGCTCGCGGA-GAAATTGGAGCT 788
BSNT_01103___ 747 TGTTGGACCGCTTGCAGTTGAGATGTTCCTGACAGAGGACGGAGAGCTTT 796
|||.||.||||||||.||.||.||||||.|.||.||.||||||||.||||
RBAM_006850__ 789 TGTCGGGCCGCTTGCGGTGGAAATGTTCGTCACGGAAGACGGAGACCTTT 838
BSNT_01103___ 797 TGGTCAATGAACTGGCGCCAAGACCGCACAATTCTGGGCATTATACGCTG 846
||.|.||||||||||||||..|.||.|||||.||.||||||||||||||.
RBAM_006850__ 839 TGATTAATGAACTGGCGCCGCGTCCTCACAACTCCGGGCATTATACGCTC 888
BSNT_01103___ 847 GACCTTTGCGAGACGAGCCAGTTTGAGCAGCATATCAGAGCGGTATGCGG 896
||||||||.||.||||||||.||.||.|||||.|||||||||||.|||||
RBAM_006850__ 889 GACCTTTGTGAAACGAGCCAATTCGAACAGCACATCAGAGCGGTCTGCGG 938
BSNT_01103___ 897 GCTTCCGCTTGGGAAGACAGATTTGCTGAAGCCGGGCATGATGGTGAATC 946
.|||||.||.||.|..||.|||.|.||.||.|||||.|||||||||||||
RBAM_006850__ 939 ACTTCCTCTCGGCAGAACCGATCTTCTCAAACCGGGAATGATGGTGAATC 988
BSNT_01103___ 947 TTCTCGGCGATGAAGTGAAGCTTGTTGAGGAAGACCCGGAGCTTTTAAAA 996
|.|||||.||||||||||||||||..|||||..|..|||||||||||||.
RBAM_006850__ 989 TGCTCGGTGATGAAGTGAAGCTTGCGGAGGAGCATACGGAGCTTTTAAAG 1038
BSNT_01103___ 997 GAGGCAAAGCTATATATATACGGAAAACATGAAATCAAAAAAGGCCGCAA 1046
||.||.||.||.||..|.||||||||||||||.||.||||||||||||||
RBAM_006850__ 1039 GAAGCCAAACTGTACCTGTACGGAAAACATGAGATTAAAAAAGGCCGCAA 1088
BSNT_01103___ 1047 AATGGGGCATATTACATTTATGAAGCAGCCTGAAGACGAATGGATTCAGG 1096
||||||||||||.||||||.||..|.|||||||.||...|||||||||||
RBAM_006850__ 1089 AATGGGGCATATGACATTTTTGCGGAAGCCTGATGAAACATGGATTCAGG 1138
BSNT_01103___ 1097 AGATCACAAATAAATGGATGAATAGAGACGGAGGACAAGCAGAATGA 1143
|.|||||.||.|.|||||||||.|||||||||||||.||||.||
RBAM_006850__ 1139 ACATCACGAACATATGGATGAAAAGAGACGGAGGACGAGCATAA--- 1182
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