Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01101 and RBAM_006840

See Amino acid alignment / Visit BSNT_01101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence dna-align/BSNT_01101___purE.1.9828.seq
#    -bsequence dna-align/RBAM_006840___purE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01101___purE-RBAM_006840___purE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01101___purE-RBAM_006840___purE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01101___purE
# 2: RBAM_006840___purE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity:     408/492 (82.9%)
# Similarity:   408/492 (82.9%)
# Gaps:           6/492 ( 1.2%)
# Score: 1706.0
# 
#
#=======================================

BSNT_01101___      1 ATGCAGCCGCTAGTAGGAATCATCATGGGAAGCACTTCCGATTGGGAGAC     50
                     |||||||||||||.|||||||||||||||||||||.||||||||||||||
RBAM_006840__      1 ATGCAGCCGCTAGCAGGAATCATCATGGGAAGCACCTCCGATTGGGAGAC     50

BSNT_01101___     51 AATGAAACACGCATGCGACATACTTGACGAACTCAATGTTCCGTACGAAA    100
                     |||||||||.|||||||||||||||||||||||..|..||||.||.||||
RBAM_006840__     51 AATGAAACATGCATGCGACATACTTGACGAACTTCACATTCCTTATGAAA    100

BSNT_01101___    101 AAAAGGTCGTTTCCGCTCACCGGACGCCTGATTTCATGTTTGAATATGCT    150
                     ||.||||.||.|||||.|||||||||||||||||.||||||||||||||.
RBAM_006840__    101 AACAGGTGGTATCCGCGCACCGGACGCCTGATTTGATGTTTGAATATGCA    150

BSNT_01101___    151 GAAACTGCTAGAGAAAGAGGCATCAAGGTGATTATTGCCGGTGCCGGAGG    200
                     ||||..||.|||||.||.||..|.||.||.|||||||||||.||||||||
RBAM_006840__    151 GAAAGCGCAAGAGACAGGGGTTTAAAAGTCATTATTGCCGGAGCCGGAGG    200

BSNT_01101___    201 AGCGGCGCATCTGCCAGGGATGACGGCTGCGAAAACAACACTGCCAGTCA    250
                     |||||||||||||||.||.||||||||.||.|||||.||.|||||.||.|
RBAM_006840__    201 AGCGGCGCATCTGCCGGGAATGACGGCGGCCAAAACGACGCTGCCGGTGA    250

BSNT_01101___    251 TTGGAGTTCCGGTTCAGTCCAAGGCGCTGAACGGAATGGATTCACTTCTT    300
                     |.||.||.|||||||||.|.||..||||.|||||..|.|||||.|||||.
RBAM_006840__    251 TCGGCGTACCGGTTCAGACGAAATCGCTTAACGGGCTTGATTCTCTTCTG    300

BSNT_01101___    301 TCCATCGTCCAAATGCCTGGAGGCGTGCCTGTTGCGACAACATCCATCGG    350
                     ||.|||||.||.|||||.||.||||||||.||.|||||.||..|.|||||
RBAM_006840__    301 TCTATCGTACAGATGCCCGGCGGCGTGCCGGTCGCGACGACGGCGATCGG    350

BSNT_01101___    351 CAAAGCGGGTGCTGTGAACGCAGGCCTGTTAGCGGCGCAAATTTTGTCAG    400
                     .||||||||.||.||||||||.||.||||||||.||||||||||||||.|
RBAM_006840__    351 GAAAGCGGGCGCAGTGAACGCGGGTCTGTTAGCCGCGCAAATTTTGTCGG    400

BSNT_01101___    401 CATTTGACGAAGACCTTGCCCGTAAGCTGGATGAGAGAAGAGAAAAT---    447
                     ||||||||||.|||.||||...|||.||.||.|.||||||   ||||   
RBAM_006840__    401 CATTTGACGATGACATTGCGGATAAACTAGAGGCGAGAAG---AAATGCG    447

BSNT_01101___    448 ACAAAACAGACAGTGTTAGAAAGCAGTGATCAGCTTGTCTAA    489
                     ||||||||.||.|||.|.||||||||||||||||||||||||
RBAM_006840__    448 ACAAAACAAACGGTGCTGGAAAGCAGTGATCAGCTTGTCTAA    489


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