Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01093 and RBAM_006790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01093___pbuG.1.9828.seq
# -bsequence dna-align/RBAM_006790___pbuG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01093___pbuG-RBAM_006790___pbuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01093___pbuG-RBAM_006790___pbuG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01093___pbuG
# 2: RBAM_006790___pbuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1325
# Identity: 1058/1325 (79.8%)
# Similarity: 1058/1325 (79.8%)
# Gaps: 4/1325 ( 0.3%)
# Score: 4198.0
#
#
#=======================================
BSNT_01093___ 1 TTGAAAAAGTATTTTCAGTTTGATGAGCTGGGCACCAGCTATCGCAATGA 50
|||||..|.|.|||||||||||||||||||||.||.||||||||.|||||
RBAM_006790__ 1 TTGAAGCAATTTTTTCAGTTTGATGAGCTGGGGACAAGCTATCGTAATGA 50
BSNT_01093___ 51 AATCATTGGCGGATTAACGACTTTTTTATCTATGGCATATATATTGTTCG 100
||||||.|||||.||||||||.|||||.||.|||||.||.||..||||||
RBAM_006790__ 51 AATCATCGGCGGTTTAACGACCTTTTTGTCAATGGCGTACATTCTGTTCG 100
BSNT_01093___ 101 TCAATCCGATTACGCTTG-CTTTGGACAGCGTGAAAGATTTTCCGGAGGC 149
||||.|||.|.|| .||| ||||..||.|.|||||.|..|||||.||.||
RBAM_006790__ 101 TCAACCCGCTGAC-ATTGTCTTTAAACGGTGTGAAGGGATTTCCCGAAGC 149
BSNT_01093___ 150 ACTGAGAATTGACCAGGGTGCGGTCTTTACGGCGACAGCGCTGGCGTCTG 199
|.|.|.||||||.|||||.|||||.||.||.||.|||||..|||||||||
RBAM_006790__ 150 ATTAAAAATTGATCAGGGCGCGGTGTTCACCGCTACAGCCTTGGCGTCTG 199
BSNT_01093___ 200 CAGCAGGCTGTATCTTAATGGGATTAATAGCGAGATATCCGATTGCCATC 249
|.||.||||||||.||||||||..|.||.||.|..||||||||.||.||.
RBAM_006790__ 200 CGGCCGGCTGTATTTTAATGGGGCTCATTGCAAAGTATCCGATCGCGATT 249
BSNT_01093___ 250 GCGCCGGGTATGGGGCTGAACGCGTTTTTTGCGTTTTCTGTTGTCCTTGG 299
||||||||||||||..|.||.|||||||||||.||.|||||.||.|||||
RBAM_006790__ 250 GCGCCGGGTATGGGATTAAATGCGTTTTTTGCTTTCTCTGTCGTACTTGG 299
BSNT_01093___ 300 TATGGGTATTTCATGGCAGGCAGCTTTGTCTGGTGTTTTTATTTCAGGCC 349
.|||||.||||||||||||||.||..|.||.||.||.||.|||||.||..
RBAM_006790__ 300 CATGGGGATTTCATGGCAGGCTGCGCTTTCCGGCGTCTTGATTTCCGGAA 349
BSNT_01093___ 350 TTATTTTCGTTGCTCTTTCTTTAACAGGTTTTCGTGAAAAAATCATCAAC 399
||||||||||.||.|||||..|.||.||..|.||.|||||||||||.||.
RBAM_006790__ 350 TTATTTTCGTGGCGCTTTCGCTGACGGGACTGCGGGAAAAAATCATTAAT 399
BSNT_01093___ 400 GCCATTCCGCCTGAGCTGAAATTGGCAGTCGGTGCGGGGATCGGCCTGTT 449
||.|||||||||||||||||||||||.|||||.|||||.|||||..||||
RBAM_006790__ 400 GCGATTCCGCCTGAGCTGAAATTGGCGGTCGGCGCGGGTATCGGTTTGTT 449
BSNT_01093___ 450 TATTACATTCGTTGGTTTGCAAGGCTCAGGAATCATTACTGCAAATCCTT 499
|||.|||||.||.||||||||.||.||.||.||.|||...||.||..|.|
RBAM_006790__ 450 TATCACATTTGTCGGTTTGCAGGGTTCGGGCATTATTGAAGCGAACTCAT 499
BSNT_01093___ 500 CTACGCTCGTCACGATCGGAAACATTCACAGCGGTCCTGTGCTGTTAACG 549
|.||..|.||..|.|||||.||.|||||||||||.|||||||||.|.|||
RBAM_006790__ 500 CGACTTTGGTGTCTATCGGCAATATTCACAGCGGCCCTGTGCTGCTGACG 549
BSNT_01093___ 550 ATTTTCGGTGTGATTGTCACGGTTATTTTAATGGTGCTTCGCGTGAACGC 599
.||||||||||.|||||.|||||.|||.|.||||||||||||||.||||.
RBAM_006790__ 550 GTTTTCGGTGTTATTGTGACGGTCATTCTGATGGTGCTTCGCGTAAACGG 599
BSNT_01093___ 600 AGGCGTGTTTATCGGGATGCTGTTAACAGCGGTTGCCGGCATGATTTTCG 649
.|||||.||||||||.|||||..|.||.|||||||||||||||.|.|.||
RBAM_006790__ 600 CGGCGTATTTATCGGAATGCTTCTGACGGCGGTTGCCGGCATGGTCTGCG 649
BSNT_01093___ 650 GTTTGGTTCCGGTTCCGACTCAAATTGTCGGCAGTGTGCCGAGCCTTGCG 699
|..||.|||||||||||||.||.|||||||||||.||||||||.||||||
RBAM_006790__ 650 GACTGATTCCGGTTCCGACGCACATTGTCGGCAGCGTGCCGAGTCTTGCG 699
BSNT_01093___ 700 CCGACTTTCGGACAAGCGTGGATTCACCTCCCGGATATTTTCTCCGTACA 749
||||||||||||||.||||||||.||.||.||||||||.||||||||.||
RBAM_006790__ 700 CCGACTTTCGGACAGGCGTGGATGCATCTTCCGGATATCTTCTCCGTCCA 749
BSNT_01093___ 750 AATGCTGATCGTTATTTTAACATTCTTGTTTGTCGGATTTTTTGATACAG 799
|||||||||.||.||||||||.|||.||||.|||||.|||||.|||||.|
RBAM_006790__ 750 AATGCTGATTGTCATTTTAACGTTCCTGTTCGTCGGGTTTTTCGATACGG 799
BSNT_01093___ 800 CTGGTACACTTGTTGCTGTGGCAACACAAGCTGGTTTAATGAAGGAAAAC 849
|.||.||.||.||.|||||.||.|||||.||.||..|.||||||||||||
RBAM_006790__ 800 CCGGAACGCTGGTGGCTGTAGCGACACAGGCCGGGCTGATGAAGGAAAAC 849
BSNT_01093___ 850 AAATTGCCGCGTGCGGGCCGTGCGCTTTTAGCTGATTCATCTTCTATTGT 899
|||.|.|||||||||||..|.||||||.|.||.||||||.|.||.||.||
RBAM_006790__ 850 AAACTTCCGCGTGCGGGAAGAGCGCTTCTGGCGGATTCAACATCAATCGT 899
BSNT_01093___ 900 GATCGGTGCCGTGCTTGGTACGTCTACAACAACTTCTTACGTGGAATCAA 949
.|||||.|||||.||.||||||||.|||||.||||||||.||.|||||.|
RBAM_006790__ 900 TATCGGAGCCGTACTCGGTACGTCCACAACGACTTCTTATGTTGAATCCA 949
BSNT_01093___ 950 GCTCAGGTGTCGCTGCGGGTGCCCGTTCAGGATTTGCCGCAATTGTAACA 999
|||||||.||.||.|||||.||.||.||.||.||.||.||..||||.||.
RBAM_006790__ 950 GCTCAGGCGTTGCGGCGGGGGCGCGCTCCGGCTTCGCGGCTGTTGTGACG 999
BSNT_01093___ 1000 GGGATTCTCTTTTTACTGGCTACGTTTTTCTCTCCGCTCCTATCAGTCGT 1049
||.|||||||||||.|||||.|.|||||||||.|||||.||.|||||.||
RBAM_006790__ 1000 GGCATTCTCTTTTTGCTGGCGATGTTTTTCTCGCCGCTTCTGTCAGTTGT 1049
BSNT_01093___ 1050 TACGTCAAATGTAACAGCGCCGGCGCTTATTATTGTTGGTGCATTGATGG 1099
.||..|.|||||.||.||.|||||..|.||||||||.||.||..||||||
RBAM_006790__ 1050 CACCACGAATGTGACGGCTCCGGCTTTAATTATTGTCGGCGCGCTGATGG 1099
BSNT_01093___ 1100 TGGCGCCGCTTGGCAAAATCGCTTGGGATAAGTTCGAAGTGGCCGTTCCT 1149
||||||||||.||.||.|||||.||||||||.|||||.|||||.||.||.
RBAM_006790__ 1100 TGGCGCCGCTCGGTAAGATCGCCTGGGATAAATTCGAGGTGGCTGTGCCG 1149
BSNT_01093___ 1150 GCTTTCCTTACCATGATCATGATGCCGTTAACGTACAGCATAGCGACTGG 1199
||.|||.|.||.|||||.|||||||||.|.|||||||||||.|||||.||
RBAM_006790__ 1150 GCATTCTTAACGATGATTATGATGCCGCTGACGTACAGCATTGCGACGGG 1199
BSNT_01093___ 1200 TATTGCCATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAA 1249
.|||||.|||||.|||||.|||||.||||||||||||.|.||||||||||
RBAM_006790__ 1200 GATTGCGATCGGTTTTATATTCTACCCGATTACAATGATCTGCAAAGGAA 1249
BSNT_01093___ 1250 AAGCAAAAGAG-GTTCATCCAATCATGTACGGGCTGTTTCTCGTATTTAT 1298
|||.|||| || |||||.||.||.||||||||||||||..||.|.|||||
RBAM_006790__ 1250 AAGGAAAA-AGCGTTCACCCGATTATGTACGGGCTGTTCGTCATCTTTAT 1298
BSNT_01093___ 1299 CCTGTACTTTATCTTCTTAAAATAA 1323
||||||.||.||||||||.||||||
RBAM_006790__ 1299 CCTGTATTTCATCTTCTTGAAATAA 1323
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