Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01086 and RBAM_006720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_01086___yeaB.1.9828.seq
# -bsequence dna-align/RBAM_006720___yeaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01086___yeaB-RBAM_006720___yeaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01086___yeaB-RBAM_006720___yeaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01086___yeaB
# 2: RBAM_006720___yeaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity: 676/882 (76.6%)
# Similarity: 676/882 (76.6%)
# Gaps: 18/882 ( 2.0%)
# Score: 2562.0
#
#
#=======================================
BSNT_01086___ 1 ATGGAGAGATATGATGAATTGAAAAAGGGTGAATCCGGGGCGCTGGTCAG 50
.|||||||||||.|||||||||||||.||.|||.||||.|||.|.|||||
RBAM_006720__ 1 GTGGAGAGATATCATGAATTGAAAAAAGGCGAAACCGGAGCGATTGTCAG 50
BSNT_01086___ 51 CATTGCCGCGTAT-----CTTGTTCTTTCCGCAATTAAACTGATCATCGG 95
.||||.|||.||| .||| ||.|...|.||.||..|.|||||
RBAM_006720__ 51 TATTGGCGCATATGCGGCATTG-----TCGGTTGTGAAGCTTGTGATCGG 95
BSNT_01086___ 96 TTATCTTTTTCACTCGGAAGCACTTACGGCAGACGGGTTAAATAACACAA 145
||||.|.||||||||.|||||.|||..|||.|||||.||||||||.||.|
RBAM_006720__ 96 TTATTTGTTTCACTCAGAAGCGCTTCAGGCCGACGGTTTAAATAATACGA 145
BSNT_01086___ 146 CTGACATTATTGCTTCTGCTGCTGTGCTGATTGGCCTGCGCATCTCTCAA 195
||||.||..|.||.|||||.|||||..|.||.||..|||||||||||||.
RBAM_006720__ 146 CTGATATCGTGGCATCTGCGGCTGTTTTCATCGGTTTGCGCATCTCTCAG 195
BSNT_01086___ 196 AAGCCTCCTGACGAAGATCATCCATACGGCCACTTCCGAGCGGAAACGAT 245
||.||||||||||||||||||||.||||||||.||.||.||.||.||..|
RBAM_006720__ 196 AAACCTCCTGACGAAGATCATCCTTACGGCCATTTTCGGGCAGAGACCGT 245
BSNT_01086___ 246 TGCATCGCTTATCGCATCGTTTATTATGATGGTTGTCGGACTGCAAGTGC 295
.||.||.||.|||||.||..|||||||||||.||||||||.|||||||||
RBAM_006720__ 246 CGCGTCACTCATCGCTTCCATTATTATGATGCTTGTCGGAATGCAAGTGC 295
BSNT_01086___ 296 TGTTCAGCGCCGGAGAATCTATTTTTTCTGCTAAACAAGAGACGCCGGAT 345
||||||||||||...|||||||||||||.|.||||.|.||.||.||||||
RBAM_006720__ 296 TGTTCAGCGCCGCGCAATCTATTTTTTCCGTTAAAGAGGAAACACCGGAT 345
BSNT_01086___ 346 ATGATTGCGGCTTGGACGGCAGCGGGCGGGGCAGTCCTGATGCTGATCGT 395
|||||.||.||.||||||||.|||||..|.||.|||.||||||||||.||
RBAM_006720__ 346 ATGATAGCCGCCTGGACGGCCGCGGGGAGCGCCGTCGTGATGCTGATGGT 395
BSNT_01086___ 396 TTATCGGTACAATAAAAGGCTGGCCAAAAAGGTGAAGAGCCAGGCGCTCC 445
.||.||.||.|..|||.||||.|||||||||||.||.|||||||| ||
RBAM_006720__ 396 CTACCGCTATACGAAAGGGCTTGCCAAAAAGGTAAACAGCCAGGC---CC 442
BSNT_01086___ 446 TT---GCTGCGGCTGCTGATAATAAATCAGACGCATTGGTCAGTATCGGC 492
|| ||||||||.|||||||||||||||||.||..|.||||||||||||
RBAM_006720__ 443 TTTCAGCTGCGGCAGCTGATAATAAATCAGATGCGCTCGTCAGTATCGGC 492
BSNT_01086___ 493 ACGTTTATCGGCATTGTGGCTGCTCAATTCCATCTTGCTTGGATTGATAC 542
|||||||||||.|||.|.|||.|.||.||||||.|.||||||.|||||||
RBAM_006720__ 493 ACGTTTATCGGAATTTTTGCTTCACAGTTCCATTTGGCTTGGGTTGATAC 542
BSNT_01086___ 543 GGTCACTGCGTTTGTGATCGGCCTGCTTATTTGCAAGACCGCATGGGATA 592
|||.||.||||||.|.|||||..||.|.||.|||||.|||||.|||||||
RBAM_006720__ 543 GGTTACCGCGTTTATCATCGGGTTGATCATATGCAAAACCGCGTGGGATA 592
BSNT_01086___ 593 TTTTTAAAGAATCATCTCACTCTTTGACAGATGGATTCGA-CACAAAGGA 641
|||||||.|||||.|||||.||..||||.||.||.||.|| ..|||| .|
RBAM_006720__ 593 TTTTTAAGGAATCCTCTCATTCGCTGACTGACGGTTTTGATGTCAAA-CA 641
BSNT_01086___ 642 CATTTCCGCTTATAAACAGACAATCGAAAAAATCTCCGGTGTGAGCCGTT 691
.|||||.|.|||||||.||||.||.|||.|.||..|.||.||.|||||||
RBAM_006720__ 642 TATTTCTGATTATAAAAAGACGATTGAACAGATTGCGGGCGTCAGCCGTT 691
BSNT_01086___ 692 TAAAAGACATAAAAGCAAGATACTTGGGCAGTACGGTTCATGTTGATGTG 741
|||||||.||.|||||.|||||..|||||||..|.||||||.|||||||.
RBAM_006720__ 692 TAAAAGATATTAAAGCGAGATATCTGGGCAGCTCCGTTCATATTGATGTC 741
BSNT_01086___ 742 GTGGTTGAGGTATCGGCAGATTTAAATATTACGGAAAGCCACGATATAGC 791
||..||||.||..||.|||||.|.||.||||..||.||.||.||.||.||
RBAM_006720__ 742 GTCATTGAAGTGCCGTCAGATCTGAACATTAAAGAGAGTCATGAGATCGC 791
BSNT_01086___ 792 CAATGAAATTGAGCGGAGAATGAAGGAGGAGCATGCGATTGATTATTCGC 841
.|||||..|.||.||.|..|||||.|||||.|||||.|||||..||||.|
RBAM_006720__ 792 AAATGAGGTAGAACGCAAGATGAAAGAGGAACATGCCATTGACCATTCAC 841
BSNT_01086___ 842 ATGTTCATATGGAGCCTTTAGAACACAAATAA 873
|.|||||||||||||||.|..|.|..||||||
RBAM_006720__ 842 ACGTTCATATGGAGCCTCTCCAGCTGAAATAA 873
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