Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01072 and RBAM_006660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01072___ydjM.1.9828.seq
# -bsequence dna-align/RBAM_006660___ydjM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01072___ydjM
# 2: RBAM_006660___ydjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 302/373 (81.0%)
# Similarity: 302/373 (81.0%)
# Gaps: 5/373 ( 1.3%)
# Score: 1226.0
#
#
#=======================================
BSNT_01072___ 1 ATGTTGAAGAAAGTCATT-TTAGCCGCTTTTATCTTAGTAGGAAGTACTT 49
|||||| ||||.||| ||||||...||.||.||||.||||||.||..
RBAM_006660__ 1 ---TTGAAG-AAGTTATTCTTAGCCTTATTGATTTTAGCAGGAAGCACGC 46
BSNT_01072___ 50 TGGGAGCTTTTAGTTTTTCATCAGATGCCAGTGCGAAACATGTGAACGGA 99
|||||||..|.||||..||.||.|||||.|||||.|||.|.|||||||||
RBAM_006660__ 47 TGGGAGCGATCAGTTACTCTTCTGATGCAAGTGCTAAAAAAGTGAACGGA 96
BSNT_01072___ 100 AATATTACTTGGTATAACGGAGTCGGGAAAAAAGGCTCTTCAGGTAAGAA 149
||||||||.||||||||.||||||||.||||||||.|||||.|||||.||
RBAM_006660__ 97 AATATTACATGGTATAATGGAGTCGGTAAAAAAGGATCTTCCGGTAAAAA 146
BSNT_01072___ 150 ACTTGGACATTGGGATTGTGCGACCAAAATCGGATTTGATGTTCCTAGAA 199
|||.||.||.||||||||.|||||.|||.|.||||||||.|||||.||||
RBAM_006660__ 147 ACTGGGGCACTGGGATTGCGCGACAAAATTAGGATTTGACGTTCCGAGAA 196
BSNT_01072___ 200 ACGGGACAAAAATCAGAGCTTATGCAAAAGCGAAGCCTAAAAAGGTGATT 249
||||.||.|||||||||||||||||.|||.|.||.||.||||||||.||.
RBAM_006660__ 197 ACGGAACGAAAATCAGAGCTTATGCGAAATCAAAACCGAAAAAGGTTATC 246
BSNT_01072___ 250 ACGGTTTATAAAAATGATGTTGGCAGAATGCCTAATGCAGTGCTGGATGT 299
||.||.||.|||||||||||.|||.|..||||.|||||.||..|||||||
RBAM_006660__ 247 ACCGTATACAAAAATGATGTAGGCCGTCTGCCGAATGCCGTATTGGATGT 296
BSNT_01072___ 300 TAGCCCTAAAGCGTTTAAAGCGCTTGGATACCCATTAAGCAAAGGTAAAG 349
.|||||.|||||||||||||||||.|||||.||||||||||||||.|.||
RBAM_006660__ 297 CAGCCCGAAAGCGTTTAAAGCGCTCGGATATCCATTAAGCAAAGGAAGAG 346
BSNT_01072___ 350 TAGCGGGGCATTACAGCTATTAA 372
||.|.||.||.||||||||||||
RBAM_006660__ 347 TATCCGGACACTACAGCTATTAA 369
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