Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01070 and RBAM_006650

See Amino acid alignment / Visit BSNT_01070 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_01070___ydjL.1.9828.seq
#    -bsequence dna-align/RBAM_006650___ydjL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01070___ydjL-RBAM_006650___ydjL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01070___ydjL-RBAM_006650___ydjL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01070___ydjL
# 2: RBAM_006650___ydjL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1046
# Identity:     830/1046 (79.3%)
# Similarity:   830/1046 (79.3%)
# Gaps:          10/1046 ( 1.0%)
# Score: 3283.0
# 
#
#=======================================

BSNT_01070___      1 ATGAAGGCAGCAAGATGGCATAACCAAAAGGATATCCGTATTGAACATAT     50
                     |||||.||.|||||||||||.||.|||||.||.||.||.||.|||.|.||
RBAM_006650__      1 ATGAAAGCGGCAAGATGGCACAATCAAAAAGACATTCGAATCGAAAACAT     50

BSNT_01070___     51 CGAAGAGCCAAAAACGGAGCCGGGAAAAGTAAAGATCAAAGTCAAATGGT    100
                     .||.||.||.|||.|.||.|||||.|||||.||.||.|||||||||||||
RBAM_006650__     51 TGATGAACCTAAAGCAGAACCGGGTAAAGTCAAAATTAAAGTCAAATGGT    100

BSNT_01070___    101 GCGGCATCTGCGGAAGTGATTTACACGAATATCTGGGCGGCCCGATCTTT    150
                     ||||.||.||||||||.||..|.||.||||||.||||.||||||||||||
RBAM_006650__    101 GCGGGATTTGCGGAAGCGACCTTCATGAATATTTGGGAGGCCCGATCTTT    150

BSNT_01070___    151 ATTCCGGTTGACAAACCGCACCCATTAACAAATGAAACGGCACCTGTCAC    200
                     ||||||||.|.||||||.||.||.||||||||.||||.|||.||.|||||
RBAM_006650__    151 ATTCCGGTCGGCAAACCTCATCCGTTAACAAACGAAATGGCGCCCGTCAC    200

BSNT_01070___    201 AATGGGGCATGAATTCTCCGGTGAAGTTGTCGAAGTCGGAGAAGGCGTTG    250
                     .|||||.||.||||||||.||.|||||.||.|||||.||.||||||||..
RBAM_006650__    201 GATGGGTCACGAATTCTCAGGAGAAGTCGTTGAAGTGGGCGAAGGCGTCA    250

BSNT_01070___    251 AAAATTATAAAGTTGGAGACCGCGTTGTAGTCGAGCCGATTTTTGCTACA    300
                     |||||||.|..||.||.|||||.||.||.||.||.|||||||||||.|||
RBAM_006650__    251 AAAATTACAGCGTCGGCGACCGTGTCGTCGTGGAACCGATTTTTGCCACA    300

BSNT_01070___    301 CACGGCCACCAAGGCGCCTACAACCTTGATGAACAAATGGGATTCCTCGG    350
                     |||||.||.||.||.|||||.||||||||||||||||||||||||.|.||
RBAM_006650__    301 CACGGACATCAGGGAGCCTATAACCTTGATGAACAAATGGGATTCTTAGG    350

BSNT_01070___    351 CTTAGCCGGCGGAGGCGGCGGTTTCTCTGAATACGTCTCTGTGGATGAAG    400
                     ||||||.||.||.||||||||.||.||||||||.||.||.||.||.||||
RBAM_006650__    351 CTTAGCTGGAGGCGGCGGCGGATTTTCTGAATATGTATCCGTTGACGAAG    400

BSNT_01070___    401 AGCTTTTGTTCAAACTTCCTGATGAATTATCATATGAACAAGGCGCGCTC    450
                     |..|..||||.||.||||||||.||..|.||.||.|||||.||||||||.
RBAM_006650__    401 AATTGCTGTTTAAGCTTCCTGAAGAGCTTTCTTACGAACAGGGCGCGCTT    450

BSNT_01070___    451 GTTGAACCTTCTGCAGTTGCTCTATACGCTGTCCGCTCAAGCAAACTCAA    500
                     |||||.||.||.||.||.||.||.|||||.||||||..|||||||.|.||
RBAM_006650__    451 GTTGAGCCGTCAGCGGTAGCGCTTTACGCCGTCCGCCAAAGCAAATTAAA    500

BSNT_01070___    501 AGCAGGCGACAAAGCAGCTGTATTCGGCTGCGGCCCGATCGGACTTCTTG    550
                     |||.|||||||..||.||.||.||.||||||||.||||||||.||.||||
RBAM_006650__    501 AGCGGGCGACACGGCGGCAGTTTTTGGCTGCGGACCGATCGGGCTGCTTG    550

BSNT_01070___    551 TCATTGAAGCGCTGAAGGCTGCCGGTGCAACTGATATTTACGCTGTTGAG    600
                     |.||||||||.|||||.||.|||||.||.||.|||||||||||.|||||.
RBAM_006650__    551 TGATTGAAGCCCTGAAAGCGGCCGGCGCCACAGATATTTACGCGGTTGAA    600

BSNT_01070___    601 CTTTCTCCTGAACGCCAGCAAAAAGCTGAGGAGCTTGGCGCGATCATCGT    650
                     |||||.||.|||||.|||.|||||||..|.||.||.|||||.||||||.|
RBAM_006650__    601 CTTTCACCGGAACGTCAGGAAAAAGCGAAAGAACTCGGCGCTATCATCAT    650

BSNT_01070___    651 AGATCCGTCTAAAACAGACGATGTAGTCGCTGAGATTGCAGAACGTACAG    700
                     .||||||||.|||||.||||||||.||.|..||.||.||..||||.|||.
RBAM_006650__    651 TGATCCGTCAAAAACGGACGATGTCGTTGAAGAAATCGCTAAACGCACAA    700

BSNT_01070___    701 GAGGCGGTGTTGACGTAGCATTC----GAAGTCACTGGTGTCCCAGTGGT    746
                     ..|||||.|||||.||    |||    |||||.||.||.||.||.||.||
RBAM_006650__    701 ACGGCGGCGTTGATGT----TTCTTATGAAGTAACAGGCGTTCCTGTCGT    746

BSNT_01070___    747 GTTACGACAAGCCATCCAGTCCACTACAATTGCCGGTGAAACCGTCATCG    796
                     ..|.||.||.||.||||||||.||.|..||||||||||||||.||.||||
RBAM_006650__    747 TCTCCGCCAGGCGATCCAGTCAACAAACATTGCCGGTGAAACGGTTATCG    796

BSNT_01070___    797 TCAGCATTTGGGAAAAAGGTGCTGAAATCCATCCGAACGATATCGTAATC    846
                     |||||||||||||||||||.||.|||||.|||||||||||||||||.|||
RBAM_006650__    797 TCAGCATTTGGGAAAAAGGAGCGGAAATTCATCCGAACGATATCGTTATC    846

BSNT_01070___    847 AAAGAACGTACAGTAAAAGGAATTATCGGATACCGCGACATCTTCCCGGC    896
                     ||||||||.||.||||||||.||||||||||||||.|||||||||||..|
RBAM_006650__    847 AAAGAACGGACCGTAAAAGGCATTATCGGATACCGTGACATCTTCCCTTC    896

BSNT_01070___    897 TG-TATTGTCATTAATGAAAGAAGGCTATTTCTCAGCTGACAAACTCGTA    945
                     .| |.||| ||.|.||||||||.|||||.||||||||.||.||.|||||.
RBAM_006650__    897 CGTTCTTG-CACTGATGAAAGAGGGCTACTTCTCAGCAGATAAGCTCGTC    945

BSNT_01070___    946 ACGAAAAAAATCGTACTAGATGATTTGATCGAGGAAGGCTTCGGGGCTCT    995
                     ||||||||||||||.||.||.|||.||||.||.|||||||||||.|||.|
RBAM_006650__    946 ACGAAAAAAATCGTGCTCGACGATCTGATTGAAGAAGGCTTCGGCGCTTT    995

BSNT_01070___    996 TATTAAAGAGAAAAGCCAAGTCAAAATCCTTGTCAGACCTAACTAA   1041
                     .||.||||||||||.||||||.||||||.|.||||.|||.||||||
RBAM_006650__    996 AATCAAAGAGAAAAACCAAGTGAAAATCTTAGTCAAACCGAACTAA   1041


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