Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01070 and RBAM_006650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01070___ydjL.1.9828.seq
# -bsequence dna-align/RBAM_006650___ydjL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01070___ydjL-RBAM_006650___ydjL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01070___ydjL-RBAM_006650___ydjL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01070___ydjL
# 2: RBAM_006650___ydjL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1046
# Identity: 830/1046 (79.3%)
# Similarity: 830/1046 (79.3%)
# Gaps: 10/1046 ( 1.0%)
# Score: 3283.0
#
#
#=======================================
BSNT_01070___ 1 ATGAAGGCAGCAAGATGGCATAACCAAAAGGATATCCGTATTGAACATAT 50
|||||.||.|||||||||||.||.|||||.||.||.||.||.|||.|.||
RBAM_006650__ 1 ATGAAAGCGGCAAGATGGCACAATCAAAAAGACATTCGAATCGAAAACAT 50
BSNT_01070___ 51 CGAAGAGCCAAAAACGGAGCCGGGAAAAGTAAAGATCAAAGTCAAATGGT 100
.||.||.||.|||.|.||.|||||.|||||.||.||.|||||||||||||
RBAM_006650__ 51 TGATGAACCTAAAGCAGAACCGGGTAAAGTCAAAATTAAAGTCAAATGGT 100
BSNT_01070___ 101 GCGGCATCTGCGGAAGTGATTTACACGAATATCTGGGCGGCCCGATCTTT 150
||||.||.||||||||.||..|.||.||||||.||||.||||||||||||
RBAM_006650__ 101 GCGGGATTTGCGGAAGCGACCTTCATGAATATTTGGGAGGCCCGATCTTT 150
BSNT_01070___ 151 ATTCCGGTTGACAAACCGCACCCATTAACAAATGAAACGGCACCTGTCAC 200
||||||||.|.||||||.||.||.||||||||.||||.|||.||.|||||
RBAM_006650__ 151 ATTCCGGTCGGCAAACCTCATCCGTTAACAAACGAAATGGCGCCCGTCAC 200
BSNT_01070___ 201 AATGGGGCATGAATTCTCCGGTGAAGTTGTCGAAGTCGGAGAAGGCGTTG 250
.|||||.||.||||||||.||.|||||.||.|||||.||.||||||||..
RBAM_006650__ 201 GATGGGTCACGAATTCTCAGGAGAAGTCGTTGAAGTGGGCGAAGGCGTCA 250
BSNT_01070___ 251 AAAATTATAAAGTTGGAGACCGCGTTGTAGTCGAGCCGATTTTTGCTACA 300
|||||||.|..||.||.|||||.||.||.||.||.|||||||||||.|||
RBAM_006650__ 251 AAAATTACAGCGTCGGCGACCGTGTCGTCGTGGAACCGATTTTTGCCACA 300
BSNT_01070___ 301 CACGGCCACCAAGGCGCCTACAACCTTGATGAACAAATGGGATTCCTCGG 350
|||||.||.||.||.|||||.||||||||||||||||||||||||.|.||
RBAM_006650__ 301 CACGGACATCAGGGAGCCTATAACCTTGATGAACAAATGGGATTCTTAGG 350
BSNT_01070___ 351 CTTAGCCGGCGGAGGCGGCGGTTTCTCTGAATACGTCTCTGTGGATGAAG 400
||||||.||.||.||||||||.||.||||||||.||.||.||.||.||||
RBAM_006650__ 351 CTTAGCTGGAGGCGGCGGCGGATTTTCTGAATATGTATCCGTTGACGAAG 400
BSNT_01070___ 401 AGCTTTTGTTCAAACTTCCTGATGAATTATCATATGAACAAGGCGCGCTC 450
|..|..||||.||.||||||||.||..|.||.||.|||||.||||||||.
RBAM_006650__ 401 AATTGCTGTTTAAGCTTCCTGAAGAGCTTTCTTACGAACAGGGCGCGCTT 450
BSNT_01070___ 451 GTTGAACCTTCTGCAGTTGCTCTATACGCTGTCCGCTCAAGCAAACTCAA 500
|||||.||.||.||.||.||.||.|||||.||||||..|||||||.|.||
RBAM_006650__ 451 GTTGAGCCGTCAGCGGTAGCGCTTTACGCCGTCCGCCAAAGCAAATTAAA 500
BSNT_01070___ 501 AGCAGGCGACAAAGCAGCTGTATTCGGCTGCGGCCCGATCGGACTTCTTG 550
|||.|||||||..||.||.||.||.||||||||.||||||||.||.||||
RBAM_006650__ 501 AGCGGGCGACACGGCGGCAGTTTTTGGCTGCGGACCGATCGGGCTGCTTG 550
BSNT_01070___ 551 TCATTGAAGCGCTGAAGGCTGCCGGTGCAACTGATATTTACGCTGTTGAG 600
|.||||||||.|||||.||.|||||.||.||.|||||||||||.|||||.
RBAM_006650__ 551 TGATTGAAGCCCTGAAAGCGGCCGGCGCCACAGATATTTACGCGGTTGAA 600
BSNT_01070___ 601 CTTTCTCCTGAACGCCAGCAAAAAGCTGAGGAGCTTGGCGCGATCATCGT 650
|||||.||.|||||.|||.|||||||..|.||.||.|||||.||||||.|
RBAM_006650__ 601 CTTTCACCGGAACGTCAGGAAAAAGCGAAAGAACTCGGCGCTATCATCAT 650
BSNT_01070___ 651 AGATCCGTCTAAAACAGACGATGTAGTCGCTGAGATTGCAGAACGTACAG 700
.||||||||.|||||.||||||||.||.|..||.||.||..||||.|||.
RBAM_006650__ 651 TGATCCGTCAAAAACGGACGATGTCGTTGAAGAAATCGCTAAACGCACAA 700
BSNT_01070___ 701 GAGGCGGTGTTGACGTAGCATTC----GAAGTCACTGGTGTCCCAGTGGT 746
..|||||.|||||.|| ||| |||||.||.||.||.||.||.||
RBAM_006650__ 701 ACGGCGGCGTTGATGT----TTCTTATGAAGTAACAGGCGTTCCTGTCGT 746
BSNT_01070___ 747 GTTACGACAAGCCATCCAGTCCACTACAATTGCCGGTGAAACCGTCATCG 796
..|.||.||.||.||||||||.||.|..||||||||||||||.||.||||
RBAM_006650__ 747 TCTCCGCCAGGCGATCCAGTCAACAAACATTGCCGGTGAAACGGTTATCG 796
BSNT_01070___ 797 TCAGCATTTGGGAAAAAGGTGCTGAAATCCATCCGAACGATATCGTAATC 846
|||||||||||||||||||.||.|||||.|||||||||||||||||.|||
RBAM_006650__ 797 TCAGCATTTGGGAAAAAGGAGCGGAAATTCATCCGAACGATATCGTTATC 846
BSNT_01070___ 847 AAAGAACGTACAGTAAAAGGAATTATCGGATACCGCGACATCTTCCCGGC 896
||||||||.||.||||||||.||||||||||||||.|||||||||||..|
RBAM_006650__ 847 AAAGAACGGACCGTAAAAGGCATTATCGGATACCGTGACATCTTCCCTTC 896
BSNT_01070___ 897 TG-TATTGTCATTAATGAAAGAAGGCTATTTCTCAGCTGACAAACTCGTA 945
.| |.||| ||.|.||||||||.|||||.||||||||.||.||.|||||.
RBAM_006650__ 897 CGTTCTTG-CACTGATGAAAGAGGGCTACTTCTCAGCAGATAAGCTCGTC 945
BSNT_01070___ 946 ACGAAAAAAATCGTACTAGATGATTTGATCGAGGAAGGCTTCGGGGCTCT 995
||||||||||||||.||.||.|||.||||.||.|||||||||||.|||.|
RBAM_006650__ 946 ACGAAAAAAATCGTGCTCGACGATCTGATTGAAGAAGGCTTCGGCGCTTT 995
BSNT_01070___ 996 TATTAAAGAGAAAAGCCAAGTCAAAATCCTTGTCAGACCTAACTAA 1041
.||.||||||||||.||||||.||||||.|.||||.|||.||||||
RBAM_006650__ 996 AATCAAAGAGAAAAACCAAGTGAAAATCTTAGTCAAACCGAACTAA 1041
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