Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01063 and RBAM_006590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01063___ydjG.1.9828.seq
# -bsequence dna-align/RBAM_006590___ydjG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01063___ydjG-RBAM_006590___ydjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01063___ydjG-RBAM_006590___ydjG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01063___ydjG
# 2: RBAM_006590___ydjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1038
# Identity: 780/1038 (75.1%)
# Similarity: 780/1038 (75.1%)
# Gaps: 24/1038 ( 2.3%)
# Score: 2847.5
#
#
#=======================================
BSNT_01063___ 1 ATGATAATATCTTATAAGTGTCCGAACTGCGGCAGTGATATGGCATTTGA 50
|||||.||.||||||||.||.||||||||||||..||||||||..|||||
RBAM_006590__ 1 ATGATCATTTCTTATAAATGCCCGAACTGCGGCGATGATATGGTCTTTGA 50
BSNT_01063___ 51 CAGTGAAACCGGCTCGTTATCCTGCGGCAGCTGCGGAAGACAGGACAATA 100
||||..|.|||||..|.|..|.||...|||||||||..|.|||||..|.|
RBAM_006590__ 51 CAGTTCATCCGGCATGCTGACATGTCACAGCTGCGGGCGGCAGGATCAGA 100
BSNT_01063___ 101 TTGAAAGCCTTCCGAAAGAAAACATTGCGGCACGGTTTTCTGATGATGAA 150
||||||||||.||.||.||..|.|||.||.|..|.|||||.||..||||.
RBAM_006590__ 101 TTGAAAGCCTGCCAAAGGAGTATATTACGACGAGATTTTCCGAAAATGAG 150
BSNT_01063___ 151 GCAAAAGAATATCAATGTGAAAACTGCGGTGCCGTTTTGATCACGGAAGC 200
||.||.||.||.|..|||||.||.|||||.||.||.||.||.||.||.||
RBAM_006590__ 151 GCGAACGAGTACCGGTGTGAGAATTGCGGCGCGGTATTAATGACTGAGGC 200
BSNT_01063___ 201 TGAAACGACAGCAACGACGTGCAGCTTCTGCGGGGGTGCTGCAATACTTG 250
.||||||||.||.|||||||||.|.||.|||||.||.||.||..|.||.|
RBAM_006590__ 201 GGAAACGACGGCCACGACGTGCGGGTTTTGCGGAGGAGCCGCCGTTCTCG 250
BSNT_01063___ 251 CCGATCGTTTATCAGGACATTTGGCGCCGGCGAAGGTCATTCGATTTACA 300
||||.||.||.||.|||.||.|.|||||..|||.|||.||||..|||||.
RBAM_006590__ 251 CCGACCGATTGTCGGGAAATCTCGCGCCTTCGATGGTGATTCCTTTTACG 300
BSNT_01063___ 301 ATCAGCAAGCAAGAAGC--GGAGCAGGCATTTCGAAAGTGGTGCAAAAAA 348
|||||.||..||||.|| .|||| ||.|||..||||||||||..|||.
RBAM_006590__ 301 ATCAGTAAAGAAGAGGCCATGAGC--GCTTTTAAAAAGTGGTGCCGAAAC 348
BSNT_01063___ 349 GGCCTTCTGACACCAAGAGGTTTCATGTCTGCCGATCGCATTAAAAGCAT 398
||||.|||||||||.|.|||.||.|||.||||||||||..|.||.|||||
RBAM_006590__ 349 GGCCGTCTGACACCGAAAGGATTTATGACTGCCGATCGGGTGAAGAGCAT 398
BSNT_01063___ 399 CACCGGCATGTATATTCCGTTTTGGATGTTTGATTTAAATAGTGAAGTAC 448
.|||||||||||..|.|||||||||||||||||.|||||.||..|.||.|
RBAM_006590__ 399 AACCGGCATGTACGTGCCGTTTTGGATGTTTGACTTAAACAGCAAGGTTC 448
BSNT_01063___ 449 AGGTGAGAGCAAACTGTACCAGGGTCCACCGGTATGAAGAAGGGGATTAT 498
||||.|..||....|||||.||.||.||.|..||||||||.||.||.||
RBAM_006590__ 449 AGGTCAATGCCGTTTGTACGAGAGTGCATCACTATGAAGATGGAGAATA- 497
BSNT_01063___ 499 ATTTGC------ACGGAAACAGAGCACTTTGAA-GCGTTTCGTGATATCA 541
| |||||.||.|||.| ||..|| ||||..||.|||||||
RBAM_006590__ 498 -----CCGGGTGACGGAGACCGAGTA-TTACAACGCGTACCGCGATATCA 541
BSNT_01063___ 542 ATCTCGATTATTTGAAAATCCCTGTCGATGCCTCTGAAAAAATGAAAGAC 591
||||.||||||.|.|||||.||.|||||.||.||.|||||||||||.||.
RBAM_006590__ 542 ATCTTGATTATCTCAAAATTCCGGTCGACGCTTCAGAAAAAATGAATGAT 591
BSNT_01063___ 592 GAATTAATGGACAAATTGGAGCCTTATTCATACGAAGAGCTGAAGGACTT 641
||||||||||||||||||||||||||.||||||...|||||||||||.||
RBAM_006590__ 592 GAATTAATGGACAAATTGGAGCCTTACTCATACAGTGAGCTGAAGGAGTT 641
BSNT_01063___ 642 TCAAACGGCATATTTGGCCGGTTATATTGCGGAAAAGTACAATTATACCG 691
|.|.|||||.|||||.||.||.|||||.||||||||||||||||||||||
RBAM_006590__ 642 TAATACGGCCTATTTAGCGGGATATATAGCGGAAAAGTACAATTATACCG 691
BSNT_01063___ 692 ATGAGGAGCTTTTTCCGAGGGCAAAAGAGAAAATCAGCAGTTATATAGAT 741
||||.||.||.||||||.||||.||.||.|||||||||..||||||.|||
RBAM_006590__ 692 ATGACGATCTCTTTCCGCGGGCGAAGGATAAAATCAGCCATTATATTGAT 741
BSNT_01063___ 742 TCATACATCCATTCTACTTTTTCCGGATATACGTCAGTCAATGTGAGGGA 791
||.||.|||...||.||.||.||||||||||||.|.|...|..|.|.|||
RBAM_006590__ 742 TCTTATATCAGATCCACCTTCTCCGGATATACGACGGCTGACATTACGGA 791
BSNT_01063___ 792 AAAACATATTCACA-CGA-AAAACGTGAACAGCTTTTACGTTTTGCTTCC 839
..|.||.|||||.| ||| |||| |.|.||||||||||||..|||||||
RBAM_006590__ 792 TGAGCAGATTCAGACCGATAAAA--TCAGCAGCTTTTACGTACTGCTTCC 839
BSNT_01063___ 840 TGTTTGGATGGTCAGTTACGATTATGAAAGAGCGGAGCATATCTTTGCGA 889
.||.|||||||||||.|||||.|||||..|.||.||.||.||.|||||||
RBAM_006590__ 840 GGTCTGGATGGTCAGCTACGACTATGAGCGGGCTGAACACATTTTTGCGA 889
BSNT_01063___ 890 TGAACGGGCAAACAGGAAAGGTTGTTGGAAAGCCGCCGATCAGTCGAGGA 939
||||||||||.||.||.||||||||.||.||.||||||||||||...|||
RBAM_006590__ 890 TGAACGGGCAGACGGGCAAGGTTGTCGGCAAACCGCCGATCAGTGCCGGA 939
BSNT_01063___ 940 AAAGTGGCGGCATGGTTTAGCGGAATAGCAGGCGGGACATTTCTTGCGTT 989
||||||||.||.|||||..||||.|||.|.|.|||..|.|||.|.||.||
RBAM_006590__ 940 AAAGTGGCCGCGTGGTTCGGCGGCATAACCGCCGGTGCGTTTTTAGCATT 989
BSNT_01063___ 990 GAAG-CTCGTCTCATTGATGATGGGAGGCGGATTTTGA 1026
||| |||||||||.|.|||||.||||||||.||||||
RBAM_006590__ 990 -AAGACTCGTCTCACTTATGATAGGAGGCGGTTTTTGA 1026
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