Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01056 and RBAM_006550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01056___gutP.1.9828.seq
# -bsequence dna-align/RBAM_006550___gutA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01056___gutP-RBAM_006550___gutA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01056___gutP-RBAM_006550___gutA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01056___gutP
# 2: RBAM_006550___gutA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity: 1191/1399 (85.1%)
# Similarity: 1191/1399 (85.1%)
# Gaps: 29/1399 ( 2.1%)
# Score: 5139.0
#
#
#=======================================
BSNT_01056___ 1 ATGATTGAAACAGAAAAAGTAACGGCAATGAAAG-TGAAGCATCAGTCAA 49
|||||||||||||||||||.|.|||||.| |||| .|||..|||
RBAM_006550__ 1 ATGATTGAAACAGAAAAAGCAGCGGCAGT-AAAGACGAAATATC------ 43
BSNT_01056___ 50 AATCCAGTACCGGACTGTCCTGGTTTGAACGAATCGGTTATGGATTCGGC 99
.|||.|||||||||.|.|||||..||||.||.|||||||||
RBAM_006550__ 44 ---------GCGGCCTGTCCTGGATGGAACGGGTCGGCTACGGATTCGGC 84
BSNT_01056___ 100 GATATGTCGTATAATATTATCTTTCAGTTTGTAAACGCATACTTATTATT 149
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_006550__ 85 GATATGTCGTACAATATTATCTTTCAGTTTGTAAACGCATACTTATTATT 134
BSNT_01056___ 150 TTATTATACAGACGTCGGCGGCATTCAGCCTGCGGTGATCGCAACTTTGT 199
.||.|||||||||||||||||||||.||||||||||.||||||.||||||
RBAM_006550__ 135 CTACTATACAGACGTCGGCGGCATTAAGCCTGCGGTCATCGCAGCTTTGT 184
BSNT_01056___ 200 TTCTTGTTGTGCGTGTGCTGGATGCTATTTTTGACCCGATCATGGGATTG 249
|||||.|.||..|.||||||||.|||||||||||||||||.|||||..||
RBAM_006550__ 185 TTCTTATCGTAAGGGTGCTGGACGCTATTTTTGACCCGATTATGGGCGTG 234
BSNT_01056___ 250 ATTTTAGATAAAACAAATACAAGGTGGGGAAAAGCAAGGCCATATTTGCT 299
||||||||.||.||.||||||||.||||||||.||||||||.|||.|..|
RBAM_006550__ 235 ATTTTAGACAAGACGAATACAAGATGGGGAAAGGCAAGGCCGTATCTTTT 284
BSNT_01056___ 300 GTGGGTGGCATTTCCTTTTGCGCTATTCACATTCTTATGTTTTACGACGC 349
|||||||||.|||||||||||||||||.||.||||||||.||.|||||.|
RBAM_006550__ 285 GTGGGTGGCGTTTCCTTTTGCGCTATTTACGTTCTTATGCTTCACGACCC 334
BSNT_01056___ 350 CTCATTTCGGTGAGACCGGAAATATGGTATATGCGTATGTCACTTATATT 399
||||||||||.|||||.||.||||||||.||||||||..|||||||||||
RBAM_006550__ 335 CTCATTTCGGCGAGACGGGGAATATGGTTTATGCGTACATCACTTATATT 384
BSNT_01056___ 400 CTGCTTGGGATGTCCTTTAGTATGCAAACGATCCCGGTGAACAGCTTAAC 449
|||||||||||||||||.||.|||||.|||||.|||||.|||||||||||
RBAM_006550__ 385 CTGCTTGGGATGTCCTTCAGCATGCAGACGATTCCGGTCAACAGCTTAAC 434
BSNT_01056___ 450 GGGGCGGATGACGAATTCGGTGGAGGAACGGACGGTTCTGACCACAACCC 499
||||||||||||||||||.|||||||||||||||||||||||.||.||||
RBAM_006550__ 435 GGGGCGGATGACGAATTCCGTGGAGGAACGGACGGTTCTGACGACGACCC 484
BSNT_01056___ 500 GGATGATTTTGGTGTATATCGGCATTCTTTTATCCATTTCCTGTGCGACA 549
|||||||||||||.||||||||.|||||.|||||.|||||||||||||||
RBAM_006550__ 485 GGATGATTTTGGTTTATATCGGAATTCTGTTATCGATTTCCTGTGCGACA 534
BSNT_01056___ 550 CCGCTTGC-AACTGCTATCGGAGGAGAGA-ATCAGGCGTTTGGGTTTCAA 597
|||||||| .|| ||.|||||.|| ||.| |||||||||||||.||.|||
RBAM_006550__ 535 CCGCTTGCGGAC-GCCATCGGCGG-GAAAGATCAGGCGTTTGGATTCCAA 582
BSNT_01056___ 598 ATGACGGCGCTCATCTATGCGGCTGTCAGCATCGTTTTGAATCTATTTAG 647
|||||||||||.|||||||||||.||.|||||||..||||||||.||.||
RBAM_006550__ 583 ATGACGGCGCTTATCTATGCGGCGGTGAGCATCGCATTGAATCTGTTCAG 632
BSNT_01056___ 648 TTTCTTTACTGTACGGGAGCGAATTCAGCCTAAAAAGAGAAAAAAACAAG 697
||||||||||||.|||||.||.|||||||||.||||.|||||||||||||
RBAM_006550__ 633 TTTCTTTACTGTGCGGGAACGGATTCAGCCTGAAAAAAGAAAAAAACAAG 682
BSNT_01056___ 698 GGATCAAAAAGACATTATCCGTTTTATTCCAAAACAAACCCTTGCTTATG 747
|.||.||||||||.||.||.|||||.||||.||||||.||.|||||.||.
RBAM_006550__ 683 GAATGAAAAAGACGTTGTCTGTTTTGTTCCGAAACAAGCCTTTGCTCATT 732
BSNT_01056___ 748 TTAATTTCATCCTTTTTGGCTTTTGCGATCGGGTTTAATATTAAGCTCAG 797
||..||||..|.||||||||.||||||||.||||||||.|||||||||||
RBAM_006550__ 733 TTGGTTTCTGCATTTTTGGCGTTTGCGATTGGGTTTAACATTAAGCTCAG 782
BSNT_01056___ 798 CACGATGGTGTATTATTTTACGTATAACGTCAACCATAAAGAGTTCGTAT 847
.|||||||||||.|||||||||||||||||||.||||||.||.||.||.|
RBAM_006550__ 783 TACGATGGTGTACTATTTTACGTATAACGTCAGCCATAAGGAATTTGTGT 832
BSNT_01056___ 848 TTATGGGCACCGTTTTATTTTTCGGAGCAGCGCTGATCAGCAATTTGTTT 897
||.|.||.|||||.||.||||||||.||||||||||||||||||.|||||
RBAM_006550__ 833 TTTTAGGAACCGTGTTGTTTTTCGGCGCAGCGCTGATCAGCAATCTGTTT 882
BSNT_01056___ 898 ATTCCTTTCTTTTCTGAGAAGTGGGGCAGAAAACAAGTCATGATCATCAC 947
|||||||||||||||||||||.|||||.|.||.||.||.|||||||||||
RBAM_006550__ 883 ATTCCTTTCTTTTCTGAGAAGCGGGGCCGGAAGCAGGTTATGATCATCAC 932
BSNT_01056___ 948 GGCAGCTCTATCGCTTATTTCTTATGCCGGCCTGCATTTTACGCCGTATT 997
|||.||..|||||||.|||||||||||.|||||.||.|||||..||||||
RBAM_006550__ 933 GGCGGCGTTATCGCTGATTTCTTATGCGGGCCTTCAGTTTACATCGTATT 982
BSNT_01056___ 998 CTTCCATTACACTCATTTTCATTTGGCTTTTCGTTTCGGGATTTTTCACA 1047
||||..|..|.||.||||||.||||||||||||||||||||||||||||.
RBAM_006550__ 983 CTTCGCTGCCGCTTATTTTCTTTTGGCTTTTCGTTTCGGGATTTTTCACG 1032
BSNT_01056___ 1048 ACGCCTTTAAATACGCTTGCTTGGGGAATGGTGGCTGATTGCGTCGATTA 1097
||||||||||||||||||||||||||||||||.||.|||||.||||||||
RBAM_006550__ 1033 ACGCCTTTAAATACGCTTGCTTGGGGAATGGTTGCCGATTGTGTCGATTA 1082
BSNT_01056___ 1098 TGCGGAATGGAAAACCGGAGTTCGCGCGGATGGTGTTGTGATTTCGAGCA 1147
|||||||||||||||||||||.||.||.|||||.||.|||||.|||||||
RBAM_006550__ 1083 TGCGGAATGGAAAACCGGAGTCCGGGCTGATGGCGTGGTGATCTCGAGCA 1132
BSNT_01056___ 1148 TGAGCTTTATTAATAAGCTGGGTGTTGCGTTAGCCGGGTCATTTTCGGCC 1197
||||.||.||.||||||||.||.|||||||||||||||||||||||||||
RBAM_006550__ 1133 TGAGTTTCATCAATAAGCTCGGAGTTGCGTTAGCCGGGTCATTTTCGGCC 1182
BSNT_01056___ 1198 ATTTACTTAGGAATCGCCGGGTATGTGGCGAATACAGACCAGACAGTTG- 1246
.||||..|.|||||||||||.||||..||||||||.||.||||| |
RBAM_006550__ 1183 GTTTATCTCGGAATCGCCGGATATGCCGCGAATACCGATCAGAC----GA 1228
BSNT_01056___ 1247 ---CGTCATTGAATGCGATTAAAAATATGAATGCTTTGATTCCGGGATTT 1293
|||||||||||||||||||||||||||||||..|.|||||||||||.
RBAM_006550__ 1229 CCTCGTCATTGAATGCGATTAAAAATATGAATGCGCTCATTCCGGGATTG 1278
BSNT_01056___ 1294 TTCATTTTGCTTTCTATTATTCTTATCGCCTTCTATCCTTTAACGGAAAA 1343
||||||.||||.||||||||||||||..|.||.|||||||||||.|||||
RBAM_006550__ 1279 TTCATTCTGCTGTCTATTATTCTTATTTCTTTTTATCCTTTAACTGAAAA 1328
BSNT_01056___ 1344 AAGATATAAACACATCATCTCTGAGCTGGAGCAAAGGTCTGCGAGATAA 1392
||.||||.|.||.||.||.|||||.||||||||||||.||||.||||||
RBAM_006550__ 1329 AAAATATCAGCAGATGATGTCTGATCTGGAGCAAAGGGCTGCCAGATAA 1377
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