Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01055 and RBAM_006540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01055___gutB.1.9828.seq
# -bsequence dna-align/RBAM_006540___gutB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01055___gutB-RBAM_006540___gutB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01055___gutB-RBAM_006540___gutB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01055___gutB
# 2: RBAM_006540___gutB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity: 951/1134 (83.9%)
# Similarity: 951/1134 (83.9%)
# Gaps: 72/1134 ( 6.3%)
# Score: 4311.0
#
#
#=======================================
BSNT_01055___ 1 ATGGGGGCAGTAACAGAGAAAACAAAAATGTATGCACTTACATTTTATTT 50
RBAM_006540__ 0 -------------------------------------------------- 0
BSNT_01055___ 51 TCTAAAGAAAGGAACTTGCCAAATGACTCACACAGTACCTCAAAACATGA 100
||||||||||||||.|||||||||||||
RBAM_006540__ 1 ----------------------ATGACTCACACAGTGCCTCAAAACATGA 28
BSNT_01055___ 101 AAGCGGCTGTTATGCACAACACAAGAGAGATCAAAATTGAAACATTGCCT 150
|||||||.||||||||||||||.|||||.||||||||.|||||||||||.
RBAM_006540__ 29 AAGCGGCGGTTATGCACAACACGAGAGAAATCAAAATCGAAACATTGCCC 78
BSNT_01055___ 151 GTGCCTGACATCAATCATGATGAAGTGTTGATTAAGGTGATGGCTGTCGG 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_006540__ 79 GTGCCTGAGATCAATCATGATGAAGTGTTGATTAAGGTGATGGCTGTCGG 128
BSNT_01055___ 201 AATTTGCGGATCTGATCTGCATTACTATACAAATGGCCGAATAGGCAACT 250
|||||||||||||||||||||||||||||||||||||.||||||||||.|
RBAM_006540__ 129 AATTTGCGGATCTGATCTGCATTACTATACAAATGGCAGAATAGGCAATT 178
BSNT_01055___ 251 ATGTTGTGGAAAAACCATTTATCCTTGGGCATGAATGTGCGGGAGAAATT 300
||||.||||||||||||||||||||.||.|||||||||||||||||||||
RBAM_006540__ 179 ATGTAGTGGAAAAACCATTTATCCTCGGTCATGAATGTGCGGGAGAAATT 228
BSNT_01055___ 301 GCCGCTGTCGGATCAGCTGTCGATCAATTCAAAGTCGGTGACCGCGTCGC 350
|||||.||||||||..||||||||||||||||.||.||.|||||.|||||
RBAM_006540__ 229 GCCGCCGTCGGATCGTCTGTCGATCAATTCAAGGTGGGAGACCGTGTCGC 278
BSNT_01055___ 351 TGTTGAACCTGGTGTTACGTGCGGACGCTGTGAAGCGTGCAAAGAAGGGC 400
.||.|||||.|||||.||.||||||||||||||.|||||.||.|||||||
RBAM_006540__ 279 CGTCGAACCCGGTGTCACATGCGGACGCTGTGAGGCGTGTAAGGAAGGGC 328
BSNT_01055___ 401 GCTATAATCTTTGCCCGGATGTACAGTTTTTGGCTACACCGCCGGTAGAC 450
|.|||||.||||||||||||||||||||||||||.|||||||||||.|||
RBAM_006540__ 329 GTTATAACCTTTGCCCGGATGTACAGTTTTTGGCGACACCGCCGGTTGAC 378
BSNT_01055___ 451 GGCGCGTTTGTCCAATATATTAAAATGCGTCAGGACTTTGTTTTTTTAAT 500
||||||||||||||||||||.||||||||.||||||||||||||||..||
RBAM_006540__ 379 GGCGCGTTTGTCCAATATATCAAAATGCGCCAGGACTTTGTTTTTTCGAT 428
BSNT_01055___ 501 CCCAGACTCACTTTCTTATGAAGATGCTGCTTTGATCGAGCCGTTTTCTG 550
.||.||.|||||.||.|||||||||||.||||||||.||.||||||||||
RBAM_006540__ 429 TCCGGATTCACTATCCTATGAAGATGCGGCTTTGATTGAACCGTTTTCTG 478
BSNT_01055___ 551 TCGGCATCCATGCGGCGGCCAGAACGAAGCTACAGCCCGGATCAACGATT 600
|||||||.||||||||..|.|||||||||||.||||||||.||||||.||
RBAM_006540__ 479 TCGGCATTCATGCGGCCTCGAGAACGAAGCTTCAGCCCGGTTCAACGGTT 528
BSNT_01055___ 601 GCGATTATGGGGATGGGCCCTGTTGGGTTAATGGCTGTTGCCGCAGCTAA 650
|||||.|||||.|||||||||||.|||.|.|||||.|||||.||.||.||
RBAM_006540__ 529 GCGATCATGGGAATGGGCCCTGTGGGGCTGATGGCCGTTGCGGCGGCGAA 578
BSNT_01055___ 651 AGCATTTGGGGCAGGCACAATCATTGTCACCGACTTAGAGCCGCTGCGGT 700
|||||..||||||||||||||.|||||.||||||||.||||||||||||.
RBAM_006540__ 579 AGCATACGGGGCAGGCACAATTATTGTGACCGACTTGGAGCCGCTGCGGC 628
BSNT_01055___ 701 TAGAAGCTGCGAAAAAAATGGGAGCGACTCACATTATTAATATACGTGAA 750
||||.||.||||||||||||||.|||||.||..|.||.|||.|.||.|||
RBAM_006540__ 629 TAGATGCCGCGAAAAAAATGGGTGCGACGCATGTCATCAATGTCCGGGAA 678
BSNT_01055___ 751 CAGGATGCACTTGAAGAGATTAAAACGATCACGAATGATAGAGGCGTTGA 800
||||||||...||||||.||.||||||||||||||||..|||||||||||
RBAM_006540__ 679 CAGGATGCCGGTGAAGAAATCAAAACGATCACGAATGGCAGAGGCGTTGA 728
BSNT_01055___ 801 TGTTGCTTGGGAAACAGCAGGGAATCCAGCGGCATTGCAATCCGCACTGG 850
||.|||.|||||||||||.||||||||.||||||||||||||||||||||
RBAM_006540__ 729 TGCTGCCTGGGAAACAGCGGGGAATCCGGCGGCATTGCAATCCGCACTGG 778
BSNT_01055___ 851 CTTCTGTGCGCCGGGGCGGAAAATTGGCGATTGTCGGTTTGCCTTCACAG 900
||||.||||||||||||||||||.||||||||||||||||||||||.|||
RBAM_006540__ 779 CTTCCGTGCGCCGGGGCGGAAAACTGGCGATTGTCGGTTTGCCTTCTCAG 828
BSNT_01055___ 901 AACGAGATTCCGCTCAACGTGCCGTTTATTGCGGATAATGAGATTGATAT 950
|||||||||||||||||.||||||||||||||.|||||.|||||||||||
RBAM_006540__ 829 AACGAGATTCCGCTCAATGTGCCGTTTATTGCAGATAACGAGATTGATAT 878
BSNT_01055___ 951 TTACGGGATCTTCCGTTATGCCAATACGTATCCAAAGGGAATCGAATTTC 1000
.|||||.||||||||||||||.|||||||||||.|.||||||.|||||||
RBAM_006540__ 879 ATACGGAATCTTCCGTTATGCGAATACGTATCCGAGGGGAATTGAATTTC 928
BSNT_01055___ 1001 TCGCTTCCGGCATTGTGGACACGAAGCATCTAGTAACGGACCAATATTCG 1050
|||||||||||||.|||||||||||||||||.||||||||||||||..||
RBAM_006540__ 929 TCGCTTCCGGCATAGTGGACACGAAGCATCTTGTAACGGACCAATACCCG 978
BSNT_01055___ 1051 CTGGAGCAGACACAAGAGGCGATGGAACGGGCGCTTCAATTTAAGAATGA 1100
||||||.||||.||||||||||||||||||||..||||||..||.|||||
RBAM_006540__ 979 CTGGAGAAGACGCAAGAGGCGATGGAACGGGCCTTTCAATACAAAAATGA 1028
BSNT_01055___ 1101 ATGTTTAAAAGTGATGGTGTATCCAAATCGCTGA 1134
|||.||||||||||||||||||||||||||||||
RBAM_006540__ 1029 ATGCTTAAAAGTGATGGTGTATCCAAATCGCTGA 1062
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