Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01047 and RBAM_006470

See Amino acid alignment / Visit BSNT_01047 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence dna-align/BSNT_01047___groES.1.9828.seq
#    -bsequence dna-align/RBAM_006470___groES.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01047___groES-RBAM_006470___groES.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01047___groES-RBAM_006470___groES.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01047___groES
# 2: RBAM_006470___groES
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     278/285 (97.5%)
# Similarity:   278/285 (97.5%)
# Gaps:           0/285 ( 0.0%)
# Score: 1362.0
# 
#
#=======================================

BSNT_01047___      1 TTGTTAAAGCCATTAGGTGATCGCGTTGTCATTGAACTCGTAGAATCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006470__      1 TTGTTAAAGCCATTAGGTGATCGCGTTGTCATTGAACTCGTAGAATCTGA     50

BSNT_01047___     51 AGAAAAAACTGCCAGCGGAATTGTGTTGCCGGATTCTGCAAAAGAAAAAC    100
                     |||||||||||||||||||||.||.||.||||||||||||||||||||.|
RBAM_006470__     51 AGAAAAAACTGCCAGCGGAATCGTATTACCGGATTCTGCAAAAGAAAAGC    100

BSNT_01047___    101 CGCAAGAAGGCAAAATCGTGGCAGCTGGTTCAGGTCGCGTGTTAGAAAGC    150
                     |||||||||||||||||||||||||.|||||||||||||||||.||||||
RBAM_006470__    101 CGCAAGAAGGCAAAATCGTGGCAGCCGGTTCAGGTCGCGTGTTGGAAAGC    150

BSNT_01047___    151 GGAGAGCGCGTTGCTTTAGAAGTAAAAGAGGGCGACCGCATTATCTTCTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006470__    151 GGAGAGCGCGTTGCTTTAGAAGTAAAAGAGGGCGACCGCATTATCTTCTC    200

BSNT_01047___    201 AAAATACGCAGGTACTGAAGTGAAATACGAAGGTACTGAATACTTAATCT    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
RBAM_006470__    201 AAAATACGCCGGTACTGAAGTGAAATACGAAGGTACTGAATACTTAATCT    250

BSNT_01047___    251 TACGTGAAAGCGACATTTTAGCTGTTATCGGCTAA    285
                     |||||||||||||||||||||||||||||||||||
RBAM_006470__    251 TACGTGAAAGCGACATTTTAGCTGTTATCGGCTAA    285


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.