Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01038 and RBAM_006410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence dna-align/BSNT_01038___moaC.1.9828.seq
# -bsequence dna-align/RBAM_006410___moaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01038___moaC-RBAM_006410___moaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01038___moaC-RBAM_006410___moaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01038___moaC
# 2: RBAM_006410___moaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 554
# Identity: 417/554 (75.3%)
# Similarity: 417/554 (75.3%)
# Gaps: 52/554 ( 9.4%)
# Score: 1667.5
#
#
#=======================================
BSNT_01038___ 1 GTGTATGATCTGTTTAAGGAGCGTTTTAATATGAATGGATTTTCTCATTT 50
||||||||||||||||||||
RBAM_006410__ 1 ------------------------------ATGAATGGATTTTCTCATTT 20
BSNT_01038___ 51 TAATGAACAGGGCAGAGCCCAGATGGTGGATATTAGCGAAAAATCTTCGA 100
|||||||.|.|||.|.||||..|||||||||||.|||||.||||||||.|
RBAM_006410__ 21 TAATGAAGAAGGCCGTGCCCGCATGGTGGATATAAGCGATAAATCTTCAA 70
BSNT_01038___ 101 CTGTCCGTACTGCGGCGGCTGTTTCAAGCGTACACATGAAGAATGAGGTG 150
|.|||||||||||.||.||..|.||.|||||||||||||||.||||.|||
RBAM_006410__ 71 CAGTCCGTACTGCCGCTGCGATATCCAGCGTACACATGAAGCATGACGTG 120
BSNT_01038___ 151 TACGAGAAAATACAGAGTCA-------TGATATCGGCAAAGGAGATGTAC 193
||| || ||||.||| .||.|||||.||||||||.||.|
RBAM_006410__ 121 TAC-AG------CAGAATCAAAAACCGCGAGATCGGAAAAGGAGACGTGC 163
BSNT_01038___ 194 TGGCTGTCGCACAGGTGGCAGGCATTATGGCCGCAAAGCAAACGT---CG 240
|||||||||||||||||||.||.|||||||||||||||||.|||| ||
RBAM_006410__ 164 TGGCTGTCGCACAGGTGGCCGGAATTATGGCCGCAAAGCAGACGTCAGCG 213
BSNT_01038___ 241 AATATCATTCCGATGTGCCATCCGCTTTCATTGAGCGGGGTAGATATATC 290
|.|||| |||||||||||.||||||||.||.|||.|.||.||.||.||
RBAM_006410__ 214 ATTATC---CCGATGTGCCACCCGCTTTCTTTAAGCAGCGTTGACATTTC 260
BSNT_01038___ 291 GTTTGACTGGAAAATAAAAGAAGCAGAAGTTATACTTCATATAAAAGCAC 340
.||.|.||||.|...|||.||..|.||||...|.|||||||||.|.|||
RBAM_006410__ 261 ATTCGGCTGGGAGGAAAAGGATTCCGAAGCCGTTCTTCATATACAGGCA- 309
BSNT_01038___ 341 AG-GTCAAAACGAAAGGGAGTACAGGTGTGGAAATGGAAGCGCTCACTTC 389
|| ||.||||||||||||||||||||||||||||||||||||||.|||||
RBAM_006410__ 310 AGCGTAAAAACGAAAGGGAGTACAGGTGTGGAAATGGAAGCGCTAACTTC 359
BSNT_01038___ 390 TGCATCGGTGTGCGCTCTTACCGTTTACGATATGTGCAAGGCCCTTGATA 439
.||.||.||.||||||.|.||||||||.||.|||||||||||.||.||||
RBAM_006410__ 360 CGCTTCAGTCTGCGCTTTGACCGTTTATGACATGTGCAAGGCGCTGGATA 409
BSNT_01038___ 440 AGGGGATGGTCATCGGCCCTACTTTCTTGCTGGAGAAGACAGGCGGGAAA 489
|.||.||||||||||||||.||.|.|.|..||||.||||||||.||.|||
RBAM_006410__ 410 AAGGAATGGTCATCGGCCCGACCTGCCTCATGGAAAAGACAGGAGGCAAA 459
BSNT_01038___ 490 AACGGTGACTTTAAAAGAGAACTATCCGAGTATAATTTGGAGGACCAAAA 539
||||||||.|||||||||||...|||.||||||||..|||||||||||..
RBAM_006410__ 460 AACGGTGATTTTAAAAGAGATGCATCTGAGTATAAAGTGGAGGACCAATC 509
BSNT_01038___ 540 ATGA 543
||||
RBAM_006410__ 510 ATGA 513
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