Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03912 and RBAM_005880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_03912___yraE.1.9828.seq
# -bsequence dna-align/RBAM_005880___yraE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03912___yraE-RBAM_005880___yraE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03912___yraE-RBAM_005880___yraE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03912___yraE
# 2: RBAM_005880___yraE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 164/200 (82.0%)
# Similarity: 164/200 (82.0%)
# Gaps: 4/200 ( 2.0%)
# Score: 671.0
#
#
#=======================================
BSNT_03912___ 1 ATGGAATACGCCTTACATGAAGTGCTTGAGGTTCAGGAAATGACTGCTTT 50
||||....|||||||||||||.|.||.||..|||||||.|||.||.||||
RBAM_005880__ 1 ATGGCCCGCGCCTTACATGAATTACTCGAAATTCAGGAGATGGCTTCTTT 50
BSNT_03912___ 51 TAAGACACTTTGTTTGACGAAATCTAAAACAATGAAAGCACTGGTATCTG 100
||||.||||||||.||||||||||||||||.||||||||.||.|||||.|
RBAM_005880__ 51 TAAGTCACTTTGTCTGACGAAATCTAAAACCATGAAAGCGCTCGTATCCG 100
BSNT_03912___ 101 ATCCGAAGCTTAAAGAAATCATGCAGCAAGACGTTG--ACATCACCACAC 148
|||||.||||.|||||||||||||||||.||.||.| |||||| |||.
RBAM_005880__ 101 ATCCGCAGCTGAAAGAAATCATGCAGCAGGATGTGGATACATCA--ACAA 148
BSNT_03912___ 149 GGCAGCTGCAGGAGTTCGCCTCTATTTTATCTAATGCAAAGCACGAATGA 198
||||..|||||||.||.|||||.|||||||||.|||||.||||.||||||
RBAM_005880__ 149 GGCAATTGCAGGAATTTGCCTCAATTTTATCTGATGCACAGCATGAATGA 198
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