Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00804 and RBAM_005070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00804___sigB.1.9828.seq
# -bsequence dna-align/RBAM_005070___sigB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00804___sigB-RBAM_005070___sigB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00804___sigB-RBAM_005070___sigB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: RBAM_005070___sigB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 790
# Identity: 658/790 (83.3%)
# Similarity: 658/790 (83.3%)
# Gaps: 2/790 ( 0.3%)
# Score: 2750.0
#
#
#=======================================
BSNT_00804___ 1 ATGACACAACCATCAAAAACTACGAAACTAACTAAAGATGAAGTCGATCG 50
|||.||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_005070__ 1 ATGGCACAACCATCAAAAACTACGAAACTAACTAAAGATGAAGTTGATCG 50
BSNT_00804___ 51 GCTCATAAGCGATTACCAAACAAAGCAAGATGAACAAGCGCAGGAAACGC 100
|||||||.||||.|..||||||.|..|..||.||.||||.||||||||.|
RBAM_005070__ 51 GCTCATACGCGACTTTCAAACACATGATAATAAAGAAGCCCAGGAAACAC 100
BSNT_00804___ 101 TTGTGCG-GGTGTACACAAATCTGGTTGACATGCTTGCGAAAAAATACTC 149
|.|| || ||||||.||.|||||.||.||.|||||.||.||.|||||.||
RBAM_005070__ 101 TCGT-CGAGGTGTATACCAATCTCGTCGAAATGCTGGCAAAGAAATATTC 149
BSNT_00804___ 150 AAAAGGCAAAAGCTTCCACGAGGATCTCCGCCAGGTCGGCATGATCGGGC 199
||||||.||||||||.||.||.||.||||||||||||||.||||||||.|
RBAM_005070__ 150 AAAAGGAAAAAGCTTTCATGAAGACCTCCGCCAGGTCGGGATGATCGGAC 199
BSNT_00804___ 200 TGCTAGGCGCGATTAAGCGATACGATCCTGTTGTCGGCAAATCGTTTGAA 249
|.||.||.||.|||||.||.||.|||||.|..|||||||||||.||||||
RBAM_005070__ 200 TTCTCGGAGCCATTAAACGGTATGATCCCGAGGTCGGCAAATCCTTTGAA 249
BSNT_00804___ 250 GCTTTTGCAATCCCGACAATCATCGGTGAAATTAAACGTTTCCTCAGAGA 299
||.|||||.||.|||||.||||||||.||.||.|||||.|||||||||||
RBAM_005070__ 250 GCATTTGCGATTCCGACCATCATCGGCGAGATCAAACGCTTCCTCAGAGA 299
BSNT_00804___ 300 TAAAACATGGAGCGTTCATGTGCCGAGACGAATTAAAGAACTGGGTCCAA 349
|||||||||||||||.||.||.||||||||.|||||||||||.||.||..
RBAM_005070__ 300 TAAAACATGGAGCGTACACGTCCCGAGACGGATTAAAGAACTCGGGCCGC 349
BSNT_00804___ 350 GAATCAAAATGGCGGTTGATCAGCTGACCACTGAAACACAAAGATCGCCG 399
|.||.|||||||||||.|||||||||||.||.||.||.||..|.||||||
RBAM_005070__ 350 GCATTAAAATGGCGGTGGATCAGCTGACGACAGAGACGCAGCGGTCGCCG 399
BSNT_00804___ 400 AAAGTCGAAGAGATTGCCGAATTCCTCGATGTTTCTGAAGAAGAGGTTCT 449
|||||||||||.||.||.|..||.||||||||.||.|||||.||.||.||
RBAM_005070__ 400 AAAGTCGAAGAAATCGCAGCCTTTCTCGATGTGTCAGAAGAGGAAGTGCT 449
BSNT_00804___ 450 TGAAACGATGGAAATGGGCAAAAGCTATCAAGCCTTATCCGTTGACCACA 499
||||||||||||.|||||.|||||||||||.||..|.||.||.||.||||
RBAM_005070__ 450 TGAAACGATGGAGATGGGAAAAAGCTATCAGGCGCTGTCTGTCGATCACA 499
BSNT_00804___ 500 GCATTGAAGCGGATTCGGACGGAAGCACCGTCACGATTCTTGATATCGTC 549
||||.|||||||||.|||||||||||||||||||||||.|.|||||||||
RBAM_005070__ 500 GCATCGAAGCGGATGCGGACGGAAGCACCGTCACGATTTTAGATATCGTC 549
BSNT_00804___ 550 GGATCACAGGAGGACGGATATGAGCGGGTTAACCAGCAATTGATGCTGCA 599
||.||.||||||||.|||||.||.||.||.||||||||..|||||.|..|
RBAM_005070__ 550 GGGTCGCAGGAGGAAGGATACGAACGCGTCAACCAGCAGATGATGATCAA 599
BSNT_00804___ 600 AAGCGTGCTTCATGTCCTTTCAGACCGTGAAAAACAAATCATAGACCTTA 649
|||||||||||||||.||.||.|||||.|||||||||||.||.||.||.|
RBAM_005070__ 600 AAGCGTGCTTCATGTGCTGTCCGACCGCGAAAAACAAATTATCGATCTAA 649
BSNT_00804___ 650 CGTATATACAAAACAAAAGCCAAAAAGAAACTGGGGACATTCTCGGTATA 699
|.|.|.|.|||||.|||||||||||||||||.||||||||||||||.|||
RBAM_005070__ 650 CATTTGTGCAAAATAAAAGCCAAAAAGAAACAGGGGACATTCTCGGAATA 699
BSNT_00804___ 700 TCTCAAATGCACGTCTCGCGCTTGCAACGCAAAGCTGTGAAGAAGCTCAG 749
|||||||||||||||||||||.||||.||.|||||.|||||.||.||.||
RBAM_005070__ 700 TCTCAAATGCACGTCTCGCGCCTGCAGCGGAAAGCGGTGAAAAAACTGAG 749
BSNT_00804___ 750 AGAGGCCTTGATTGAAGATCCCTCGATGGAGTTAATGTAA 789
||||||||||||||.|||||||||.||||||.||||||||
RBAM_005070__ 750 AGAGGCCTTGATTGGAGATCCCTCCATGGAGCTAATGTAA 789
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