Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00803 and RBAM_005060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00803___rsbW.1.9828.seq
# -bsequence dna-align/RBAM_005060___rsbW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00803___rsbW-RBAM_005060___rsbW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00803___rsbW-RBAM_005060___rsbW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00803___rsbW
# 2: RBAM_005060___rsbW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity: 414/484 (85.5%)
# Similarity: 414/484 (85.5%)
# Gaps: 2/484 ( 0.4%)
# Score: 1778.0
#
#
#=======================================
BSNT_00803___ 1 ATGAAGA-ATAATGCTGATTACATCGAAATGAAAGTGCCGGCCCAACCTG 49
||||..| ||.| |.||||||.||.||.||||||.|.||||||.||||.|
RBAM_005060__ 1 ATGAGTACATCA-GTTGATTATATAGAGATGAAAATTCCGGCCGAACCGG 49
BSNT_00803___ 50 AATATGTGGGAATTATAAGACTGACGCTGTCAGGGGTCGCAAGCAGAATG 99
|||||||.|||||..|.||.||.|||.|.|||||||||||||||||||||
RBAM_005060__ 50 AATATGTAGGAATCGTCAGGCTTACGTTATCAGGGGTCGCAAGCAGAATG 99
BSNT_00803___ 100 GGCTATACGTACGATGAAATTGAAGACTTGAAAATCGCAGTCAGTGAGGC 149
||||||||.||.|||||.||||||||.||.||||||||.|||||.||.||
RBAM_005060__ 100 GGCTATACTTATGATGACATTGAAGATTTAAAAATCGCTGTCAGCGAAGC 149
BSNT_00803___ 150 GTGCACAAATGCGGTTCAGCACGCTTACAAAGAAGATAAAAATGGGGAAG 199
.||.|||||.||.||.|||||.||.|||||.||.||.||.||.||.||||
RBAM_005060__ 150 TTGTACAAACGCTGTCCAGCATGCATACAACGATGAAAATAAGGGAGAAG 199
BSNT_00803___ 200 TGTCAATACGATTCGGTGTGTTTGAAGACCGTTTAGAGGTTATTGTGGCG 249
|.||..|.||.||||||||||||||.||.||..|.|||||||||||.||.
RBAM_005060__ 200 TATCCGTGCGGTTCGGTGTGTTTGAGGATCGGCTGGAGGTTATTGTCGCC 249
BSNT_00803___ 250 GATGAAGGAGACAGCTTTGACTTTGATCAAAAGCAGCAGGATCTAGGGCC 299
|||.|.||||||||||||||.||||||||.||||||||||||||.|||||
RBAM_005060__ 250 GATCAGGGAGACAGCTTTGATTTTGATCAGAAGCAGCAGGATCTCGGGCC 299
BSNT_00803___ 300 GTACACACCTTCGCACACAGTTGATCAATTATCAGAAGGAGGGCTCGGTC 349
|||||||||||||||||||||.||||||||.|||||||||||||||||||
RBAM_005060__ 300 GTACACACCTTCGCACACAGTCGATCAATTGTCAGAAGGAGGGCTCGGTC 349
BSNT_00803___ 350 TATATTTAATGGAAACGCTCATGGATGAAGTCAGAGTGCAAAACCACTCC 399
|.|||||||||||||||||||||||||||||||.|||.||||.|.||||.
RBAM_005060__ 350 TGTATTTAATGGAAACGCTCATGGATGAAGTCAAAGTTCAAAGCAACTCT 399
BSNT_00803___ 400 GGCGTCACCGTAGCGATGACAAAGTATTTAAATGGGGAGCGAGTTGATCA 449
|||||.|||||.||||||||||||||||||||||||||||||||||||||
RBAM_005060__ 400 GGCGTAACCGTGGCGATGACAAAGTATTTAAATGGGGAGCGAGTTGATCA 449
BSNT_00803___ 450 TGACACAACCATCAAAAACTACGAAACTAACTAA 483
||.|||||||||||||||||||||||||||||||
RBAM_005060__ 450 TGGCACAACCATCAAAAACTACGAAACTAACTAA 483
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