Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00764 and RBAM_004770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_00764___dctB.1.9828.seq
# -bsequence dna-align/RBAM_004770___dctB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00764___dctB-RBAM_004770___dctB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00764___dctB-RBAM_004770___dctB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00764___dctB
# 2: RBAM_004770___dctB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity: 792/1074 (73.7%)
# Similarity: 792/1074 (73.7%)
# Gaps: 42/1074 ( 3.9%)
# Score: 2789.0
#
#
#=======================================
BSNT_00764___ 1 ATGAAGAGTTTGCTTGCATGTCTC-GCACTGATGATCGCT-GGAATTGCA 48
|||||.||.|||||..|.|||||| || ||||||.| .|| ||.||.|.|
RBAM_004770__ 1 ATGAAAAGCTTGCTGACTTGTCTCAGC-CTGATGGT-ACTCGGTATCGGA 48
BSNT_00764___ 49 ACCGCTTTATTTATTGGATTCCATGATCAT------ACAGGCAATAAAAA 92
|||||||||||.||.||.||.|||||||.| ||.| ||
RBAM_004770__ 49 ACCGCTTTATTCATCGGCTTTCATGATCGTTTCTCAACGG--------AA 90
BSNT_00764___ 93 G-ATTGT-TTATGATGACGAACAGGAAGGCCTGCAGGATCAAATCGTGTT 140
| |..|| |||||||||||||||||||||||||.|.|||||||||||.||
RBAM_004770__ 91 GAACCGTATTATGATGACGAACAGGAAGGCCTGAAAGATCAAATCGTTTT 140
BSNT_00764___ 141 TAAATTCAGCCACGTGGTTGCTGAAAATACGCCAAAAGGGCTGGCCGCCA 190
.|||||||||||.||.||||||||.||.|||||||||||||.|||.||.|
RBAM_004770__ 141 CAAATTCAGCCATGTCGTTGCTGAGAACACGCCAAAAGGGCGGGCGGCGA 190
BSNT_00764___ 191 ATAAATTCGCTGATTTGGTGAACGAAAAATCAGGCGGGAAAATAAAAATA 240
||||.||.||.||..|.||..|..||||.||.|||||.|..||.|||.||
RBAM_004770__ 191 ATAAGTTTGCCGACCTTGTCTATCAAAAGTCCGGCGGCACCATTAAAGTA 240
BSNT_00764___ 241 GAAGTATTTCCGAATGGAAGCCTGTACTCGGACATTGAAGAAATTGAAGC 290
||.||.|||||.||.||.|||||.||.||.||.|.|||||||||..|.||
RBAM_004770__ 241 GAGGTGTTTCCAAACGGGAGCCTCTATTCAGATAATGAAGAAATAAACGC 290
BSNT_00764___ 291 ATTGCAAAACGGCGATGTTCAATTTATCGCCCCCTCCACATCGAAGCTCG 340
..|.||||||||.||.||.|||||.|||||.||||||||.||.|||||||
RBAM_004770__ 291 CCTCCAAAACGGGGACGTGCAATTCATCGCTCCCTCCACCTCAAAGCTCG 340
BSNT_00764___ 341 G--CATGCTCTCGCCTGAATGGGGAGTGCTGGATCTGCCGTATGCATTTA 388
| || ||.||.||.||||||||.||..|||||||||||||.||.||||
RBAM_004770__ 341 GATCA--CTGTCTCCCGAATGGGGTGTTTTGGATCTGCCGTACGCGTTTA 388
BSNT_00764___ 389 CAGATTACAACGCCGTCAAAAAAGGGCTGAACGGAAGCATCGGCACACAG 438
||.|.||.||.|||||..||.||||.||.|||||.|..||||||||||..
RBAM_004770__ 389 CAAACTATAAAGCCGTGCAAGAAGGCCTCAACGGCAAAATCGGCACACGC 438
BSNT_00764___ 439 CTGTTTGATTCTCTAAAGAAAA--ACCAATTAAAAGGACTGGCCTATTGG 486
|||||.|.||||.| |||||| |.||.||.|||||.|||||.||.|||
RBAM_004770__ 439 CTGTTCGCTTCTTT--AGAAAAGCATCATTTGAAAGGTCTGGCGTACTGG 486
BSNT_00764___ 487 ACGAACGGCTTTAAGCAAATCACAACAAATCAAGGGCCGGTCAAAACACC 536
||||||||.||||||||..|.||..|||||.||||.|||.||...||.||
RBAM_004770__ 487 ACGAACGGGTTTAAGCAGCTTACGTCAAATAAAGGACCGATCTTCACTCC 536
BSNT_00764___ 537 GGATGATTTAAAAGGGCAGGATCTGCGCATTATGCAAAGCGATGTGATTG 586
|||.|||||.|||||.||||..||..|.||.||||..|||...|||||.|
RBAM_004770__ 537 GGACGATTTGAAAGGACAGGCGCTCAGGATCATGCCGAGCAGCGTGATCG 586
BSNT_00764___ 587 AGGATCAGTTCAAGCTGCTTGGCGCAACA-CCTCATCAGGAATCCTTCAA 635
|.||.||.|.|...|||||.||||| .|| ||.|..|||||.|||||.||
RBAM_004770__ 587 AAGACCAATACCGCCTGCTCGGCGC-GCACCCGCGGCAGGATTCCTTTAA 635
BSNT_00764___ 636 TTCTACCTTTCAGCTGTTAGAAAACAATGTAGTCGATGGCGAAGAAAATA 685
|||.||.||||||||.||.||||.||||.|.||.||.||.||||||||||
RBAM_004770__ 636 TTCCACGTTTCAGCTCTTGGAAAGCAATCTTGTAGACGGAGAAGAAAATA 685
BSNT_00764___ 686 CAATTTCAAACATCTATTCTAAAAAATTTTATAATGTTCAGGACTATTTG 735
|.||||||||.|||||||||||||||||||||||||||||.||.||||||
RBAM_004770__ 686 CGATTTCAAATATCTATTCTAAAAAATTTTATAATGTTCAAGATTATTTG 735
BSNT_00764___ 736 ACAATAAGCAGCCACGGTTACCTCGGCTACGCTGTCATGACTGATGAACA 785
|||||.||||..|||||.||||||||.||.||.||.|||||.||.||.||
RBAM_004770__ 736 ACAATCAGCAATCACGGGTACCTCGGTTATGCCGTGATGACCGACGAGCA 785
BSNT_00764___ 786 CTTCTGGAAGGCGCAAACACCAGAAACAAGACGCATTTTGACTGAAGCGA 835
.||||||||..||||.|||..|.||||.|||..|||.||.||.||.||||
RBAM_004770__ 786 TTTCTGGAATTCGCAGACAGAAAAAACGAGAACCATCTTAACGGAGGCGA 835
BSNT_00764___ 836 TGAAGGAGACGACGGAGTGGAATGAAACGTATGCCGAACAAATGAACAAG 885
|||..||.||||||||||||||.|||.|.|..||.||..|||||||.||.
RBAM_004770__ 836 TGAGAGAAACGACGGAGTGGAACGAAGCCTCCGCTGAGAAAATGAATAAA 885
BSNT_00764___ 886 GAGCAGCTGGAAGAAATCAAAAAGAATTCTGCTATACATATTTATGAGCT 935
||.|||||.|||||.||.||.||||||||..|.||.||||||.|||.|||
RBAM_004770__ 886 GACCAGCTTGAAGAGATAAAGAAGAATTCATCCATTCATATTCATGTGCT 935
BSNT_00764___ 936 GTCAGATAAAGAGAAACAAGA----ATGGATGAAGCGTCTTGACCCTGTT 981
| || .||||.|.|| |||| |||||||||.||.||.|||||..||
RBAM_004770__ 936 G--AG-CAAAGCGGAA-AAGAACACATGGATGAAACGCCTCGACCCGATT 981
BSNT_00764___ 982 TACCGGCAGTATGAGCCCATCTTCGGGCGGGAGCTGATCCGGAAACTGTT 1031
|||.|.||.|||||.|...|..||||.||.|.|||..|.|.|.|..||||
RBAM_004770__ 982 TACGGACAATATGAACAGGTGATCGGCCGCGGGCTTGTGCAGGATTTGTT 1031
BSNT_00764___ 1032 GGAGC--TGCGAAAAGATTCATAG 1053
|.| ||||....||..|.|||
RBAM_004770__ 1032 --ATCCTTGCGCCGCGAGCCTTAG 1053
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