Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00755 and RBAM_004690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence dna-align/BSNT_00755.1.9828.seq
# -bsequence dna-align/RBAM_004690___ydaT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00755-RBAM_004690___ydaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00755-RBAM_004690___ydaT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00755
# 2: RBAM_004690___ydaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity: 174/518 (33.6%)
# Similarity: 174/518 (33.6%)
# Gaps: 298/518 (57.5%)
# Score: 624.5
#
#
#=======================================
BSNT_00755 1 ATGCGTTTTTATTTTTCACCTGCGGGTACCATTTTTATAAAAGGAAAAGG 50
RBAM_004690__ 0 -------------------------------------------------- 0
BSNT_00755 51 AGTGATAGACATGCCTTGGTCGATGAAGGATTATCCTGC-TTCATTAAAA 99
|||||||||||.|||||||||||||| || .|||||.||.
RBAM_004690__ 1 ----------ATGCCTTGGTCTATGAAGGATTATCC-GCAATCATTGAAG 39
BSNT_00755 100 AATCTTGAGAAGCCGGTG-AGAAAAAAGGCGATAGACATTGCGAATGCGA 148
|||||.|||.|.||.||| |||||||| |||||.||.||.||||||||||
RBAM_004690__ 40 AATCTCGAGGAACCTGTGAAGAAAAAA-GCGATCGAAATCGCGAATGCGA 88
BSNT_00755 149 TGATTGATGAAGGCTATGAGGAAGAGCGCGCGATTCCAATTGCGACAAGC 198
||.|.|||||.||.|||||.||||..||.||.|||||.|||||||||||.
RBAM_004690__ 89 TGGTAGATGAGGGTTATGAAGAAGGACGGGCCATTCCCATTGCGACAAGT 138
BSNT_00755 199 AAAGCGAAGGAATGGGCGGAAAACGCCTCTACAGATGAAATTGATGATTT 248
.|.|||||.||.|||....|||||||.||||..||.|||||.|||.|..|
RBAM_004690__ 139 CAGGCGAAAGAGTGGAAAAAAAACGCTTCTAAGGAAGAAATCGATCAGCT 188
BSNT_00755 249 CCTGACGCATGATGATGAGACAGAACGCG---ATGCTGATCCAAGCAGCG 295
..|||..||.||||||||.||..|||||| || |||
RBAM_004690__ 189 GATGAAACACGATGATGAAACGAAACGCGGAAAT--TGA----------- 225
BSNT_00755 296 GCAGCGGCCCCGAGCTCATGAATAAAGCAGAGCATGTTATTAAGCATAAA 345
RBAM_004690__ 225 -------------------------------------------------- 225
BSNT_00755 346 AAAGGCTGGGCAGTCAAAGCCGAGGGCGCCAAACGCGTGTCTGAAATCAA 395
RBAM_004690__ 225 -------------------------------------------------- 225
BSNT_00755 396 GGATACAAAGAAAGAAGCGATTGAACGGGCAAAGGAAATCGCGGCGCATA 445
RBAM_004690__ 225 -------------------------------------------------- 225
BSNT_00755 446 AAGGCACTGAGGTCATTGTTCATTTAGCTGACGGCAGTGTGCAGAGAAAG 495
RBAM_004690__ 225 -------------------------------------------------- 225
BSNT_00755 496 ATTAAAACAGGATCATAA 513
RBAM_004690__ 225 ------------------ 225
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