Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00751 and RBAM_004660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence dna-align/BSNT_00751___mntH.1.9828.seq
# -bsequence dna-align/RBAM_004660___mntH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00751___mntH-RBAM_004660___mntH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00751___mntH-RBAM_004660___mntH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00751___mntH
# 2: RBAM_004660___mntH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1303
# Identity: 963/1303 (73.9%)
# Similarity: 963/1303 (73.9%)
# Gaps: 56/1303 ( 4.3%)
# Score: 3451.5
#
#
#=======================================
BSNT_00751___ 1 ATGAACAAGGACATCACAGCACAATCTCCCCGTTCCAAAGCCGTCCAAGA 50
||||.|||.||||||.||||||||||.|..|...|.||||||||.||.||
RBAM_004660__ 1 ATGAGCAAAGACATCTCAGCACAATCACTGCAAGCAAAAGCCGTGCAGGA 50
BSNT_00751___ 51 TGCGCTTGACGGGAAAATCAGAGGATTCAGAG-GGCTGCTCCCTTTTCTC 99
|||.||||||||.||||.||..||||||| || ||||.||.||||||.|.
RBAM_004660__ 51 TGCACTTGACGGCAAAAGCAAGGGATTCA-AGCGGCTTCTGCCTTTTTTA 99
BSNT_00751___ 100 GGCCCTGCATTTATAGCAGCCATTGCCTATATTGATCCCGGCAACTTCGC 149
|||||.||.|||||.||.||.||||||||.||||||||.||.||||||||
RBAM_004660__ 100 GGCCCCGCCTTTATCGCGGCGATTGCCTACATTGATCCGGGAAACTTCGC 149
BSNT_00751___ 150 AACGAATATTTCGGCGGGTTCTAAATACGGATATATGCTCTTATGGGTGA 199
.||||||||.||.||.|||||.||.||.||.||||||||..|.|||||.|
RBAM_004660__ 150 TACGAATATCTCAGCTGGTTCGAAGTATGGGTATATGCTGCTGTGGGTCA 199
BSNT_00751___ 200 TCTTATTTTCTAATATCATGGCCCTTTTAATTCAATCCCTATCCGCCAAA 249
||.|.|||||.||..|.|||||..|||||||||||...||.|||||.||.
RBAM_004660__ 200 TCCTCTTTTCAAACTTGATGGCTTTTTTAATTCAAGTTCTTTCCGCGAAG 249
BSNT_00751___ 250 CTCGGTATTGCGACAGGCAAAAATCTGCCTGAGGTTGCCCGTGA--AGAA 297
|||||.|||||.||.||.|||||.||.||.||..|.|||.|.|| .|.|
RBAM_004660__ 250 CTCGGCATTGCCACGGGTAAAAACCTTCCGGAAATCGCCAGAGACCGGTA 299
BSNT_00751___ 298 TTCCCGAAGCCTGTCTCGATCGGATTATGGATTCAGGGCGAGCTTGTCAT 347
| |||||....||.||...|||..|.|||||.|||||.||.||.||.||
RBAM_004660__ 300 T--CCGAAATGGGTATCAGCCGGGCTGTGGATACAGGGTGAACTGGTGAT 347
BSNT_00751___ 348 TATCGCAACTGACCTGGCGGAATTTATCGGAGCGGCTCTGGGACTGTATT 397
|||.||||||||.|||||.|||||||||||.|||||.||.|||||..|..
RBAM_004660__ 348 TATGGCAACTGATCTGGCAGAATTTATCGGGGCGGCGCTCGGACTCAACC 397
BSNT_00751___ 398 TGCTGTTCGGCATGCCGATGCTTGAAGCGTCTATTATTGCGGCGATCGGT 447
|||||||||||||.||||||.||||||||.|.|||||.|||||||||||.
RBAM_004660__ 398 TGCTGTTCGGCATACCGATGGTTGAAGCGGCCATTATCGCGGCGATCGGA 447
BSNT_00751___ 448 TCTTTCGCGATATTGGAGCTTCAGCGCCGCGGTTATCGCTCACTTGAAGC 497
||.||||||||.||.|||||.||||||||.|||||.||..|.||.|||||
RBAM_004660__ 448 TCATTCGCGATTTTAGAGCTGCAGCGCCGGGGTTACCGGGCGCTGGAAGC 497
BSNT_00751___ 498 CGGTATTGCCGGTATGCTGTTTGTGGTCGTGATCGCCTTTGCGCTGCAGA 547
.||.||||||||..|.|||||.||.||.|||||||||||.||.|||||.|
RBAM_004660__ 498 GGGCATTGCCGGACTTCTGTTCGTCGTGGTGATCGCCTTCGCTCTGCAAA 547
BSNT_00751___ 548 CCTTTTTCGCAAAGCCTGATGCCGTGTCAGTGATGAAGGGCCTTTTTGTC 597
||||.||.||.||.|||||.||||..||.||..|..||||.||.|||.||
RBAM_004660__ 548 CCTTCTTTGCCAAACCTGACGCCGCCTCCGTTCTCGAGGGGCTGTTTATC 597
BSNT_00751___ 598 CCGGCGTTTCATGGCACCGACAGTGTGCTTCTT-GCAGCGGGTATTCTTG 646
|||....||.|.||.|..|||||||||| |||| |||.|.||.||.||.|
RBAM_004660__ 598 CCGAAAATTGACGGAATGGACAGTGTGC-TCTTGGCAACCGGGATACTCG 646
BSNT_00751___ 647 GCGCAACTGTTATGCCGCACGCCATTTATTTACACTCTGCCCTTACACAG 696
|||||||.||.||||||||.||||||||.|||||.||.||.||.||||||
RBAM_004660__ 647 GCGCAACCGTGATGCCGCATGCCATTTACTTACATTCCGCACTGACACAG 696
BSNT_00751___ 697 CGGCGGGTGGTTGGCAAAACTGATGCAGAACGGAAAAAAATCTTTAGGTT 746
||.||.||.||.||.|||||.|||...||.||||||||.||.|||||.||
RBAM_004660__ 697 CGCCGTGTCGTCGGAAAAACGGATAGTGAGCGGAAAAAGATTTTTAGATT 746
BSNT_00751___ 747 TGAATTTATTGATATTTTAATAGCGATGCTGATTGCAGGGGCTATTAATG 796
.||....|||||.|||.|.||.||||||.||||.||.|||||.|||||.|
RBAM_004660__ 747 CGAGACGATTGACATTCTCATCGCGATGGTGATCGCCGGGGCGATTAACG 796
BSNT_00751___ 797 CAAGTATGCTGATTGTGGCTGCCGCATTATTCTTCAAAAACGGCCTGTTT 846
||||.|||||.||.||.||||||||..|.||||||||.|||||.||||.|
RBAM_004660__ 797 CAAGCATGCTCATCGTCGCTGCCGCGCTTTTCTTCAAGAACGGGCTGTAT 846
BSNT_00751___ 847 GTTGAGGATCTCGACGTCGCATTTCAGCAATTCGGACATCTTGTCAGTCC 896
||.||.|||.|.|||||.||.|.||||||||||||.|| |
RBAM_004660__ 847 GTAGAAGATTTAGACGTGGCTTATCAGCAATTCGGCCA-----------C 885
BSNT_00751___ 897 TATGTCTG--CGGCTT---------TATTCGGGATCGGGCTGCTCGTTGC 935
|||.||.| |||||| |.|||||||||||||||||.|..||
RBAM_004660__ 886 TATATCGGACCGGCTTCAGCCGTTCTCTTCGGGATCGGGCTGCTGGCCGC 935
BSNT_00751___ 936 CGGTCTATCCAGTTCGTCTGTCGGTACACTTTCAGGCGACGTGATTATGC 985
.||.||.||.||.||.||||||||.|||.|.||||||||..|.||.||||
RBAM_004660__ 936 AGGGCTTTCAAGCTCTTCTGTCGGCACATTGTCAGGCGATATTATCATGC 985
BSNT_00751___ 986 AAGGATTTATCAACTACCGCATTCCGCTGTATGTACGGCGTTTTATCACG 1035
|.||.||.|||...|||||.||.|||||.|||.|.||||||||.||.||.
RBAM_004660__ 986 AGGGCTTCATCCGTTACCGTATCCCGCTTTATTTGCGGCGTTTCATTACC 1035
BSNT_00751___ 1036 ATCATTCCGCCGATCTTGATCATC----GCGTCAGGTGTTAATCCGAC-G 1080
||||||||||||| |||||||| .| ||.||.||.||..|.|| |
RBAM_004660__ 1036 ATCATTCCGCCGA---TGATCATCATTATC-TCGGGGGTCAACGCCACAG 1081
BSNT_00751___ 1081 ACCGCTCTCGTACTGAGCCAGGTCGTGCTGTCCTTCGGGATCGCCTTTGC 1130
| .||.||||||..||||||||||||.||.||.|||||.|||.|||||||
RBAM_004660__ 1082 A-AGCGCTCGTATGGAGCCAGGTCGTTCTTTCATTCGGCATCTCCTTTGC 1130
BSNT_00751___ 1131 CCTCATTCCGCTTATTATGTTTACAAGCAATAAACGGATCATGGGATCTC 1180
.|||.|.|||||.|||||||||||||||||.|||||..|.|||||..|.|
RBAM_004660__ 1131 GCTCGTGCCGCTGATTATGTTTACAAGCAACAAACGCCTGATGGGCGCCC 1180
BSNT_00751___ 1181 TGATCAACGCCAAATGGGTCACAGTGGTGTCT----TGGCTGATTGCTGT 1226
|||..|||...||||||||.|| |..||| |||||||||||.||
RBAM_004660__ 1181 TGACGAACCGAAAATGGGTGAC----GGCTCTCGCCTGGCTGATTGCGGT 1226
BSNT_00751___ 1227 AT---TGATCGTTGCTTTGAATGTGTTTTTAATTGTA-GATACGTTTCGA 1272
.| |||||| .|||| |||.|||||.|.| |.|| |||.|.||.||.
RBAM_004660__ 1227 TTTGGTGATCG-CGCTT--AATCTGTTTGTGA-TCTACGATTCATTCCGT 1272
BSNT_00751___ 1273 TAA 1275
||.
RBAM_004660__ 1273 TAG 1275
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