Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00699 and RBAM_004240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00699.1.9828.seq
# -bsequence dna-align/RBAM_004240.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00699-RBAM_004240.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00699-RBAM_004240.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00699
# 2: RBAM_004240
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 339/445 (76.2%)
# Similarity: 339/445 (76.2%)
# Gaps: 26/445 ( 5.8%)
# Score: 1295.5
#
#
#=======================================
BSNT_00699 1 ATGCAAGTACTCGCAAAGGAAAACATTAAACTCAATCAAACGGT-ATCAT 49
|||.|||||.|.||.||.|..|||||.|||||.||.||.||||| |.| |
RBAM_004240 1 ATGGAAGTATTGGCTAAAGCGAACATCAAACTGAACCAGACGGTGAAC-T 49
BSNT_00699 50 CAAAAGAAGAGGCTATCAAATTGGCAGGCCAGACGCTGATTGACAACGGC 99
|||||||.||.||.|||....|.||.||.|||||..|||||||.||||||
RBAM_004240 50 CAAAAGAGGATGCCATCCGCCTCGCGGGACAGACATTGATTGATAACGGC 99
BSNT_00699 100 TACGTGACAGA----------GGATTACATTAGCAAAATGTTTGAACGTG 139
||||||| ||| ||| .||||||||.|||||||
RBAM_004240 100 TACGTGA-AGAACGGCTATGTGGA---------AAAAATGTTCGAACGTG 139
BSNT_00699 140 AAGAAACGTCTTCTACGTTTATGGGGAATTTCATTGCCATTCCACACGGC 189
|||||||.||.||.||||||||||||||||||||.||.||.||.||||||
RBAM_004240 140 AAGAAACATCATCCACGTTTATGGGGAATTTCATCGCGATCCCGCACGGC 189
BSNT_00699 190 ACAGAAGAAGCGAAAAG--CGAGGTGCTTCACTCAGGAATTTCAATCATA 237
||.|||||.|| |||| .|||||||||||.|||||.|||||..||||.
RBAM_004240 190 ACGGAAGATGC--AAAGGATGAGGTGCTTCATTCAGGCATTTCCGTCATC 237
BSNT_00699 238 CAGATTCCAGAGGGCGTTGAGTACGGAGAAGGCAACACGGCAAAAGTGGT 287
||||||||.||.||.||.||.|||||.||||||||.||||||||.||.||
RBAM_004240 238 CAGATTCCGGACGGTGTGGAATACGGTGAAGGCAATACGGCAAAGGTCGT 287
BSNT_00699 288 ATTCGGCATTGCGGGTAAAAATAATGAGCATTTAGACATTTTGTCTAACA 337
.|||||.||.||.||.|||||.|||||.||.||||||||..||||.||||
RBAM_004240 288 TTTCGGTATCGCCGGAAAAAACAATGAACACTTAGACATCCTGTCAAACA 337
BSNT_00699 338 TCGCCATTATCTGTTCAGAAGAAGAAAACATTGAACGCCTGATCTCCGCT 387
|||||||.|||||.|||||.|||||||||||.|||||.||||||...||.
RBAM_004240 338 TCGCCATCATCTGCTCAGAGGAAGAAAACATCGAACGGCTGATCAGTGCA 387
BSNT_00699 388 AAAAGCGAAGAAGATTTGATCGCCATTTTCAACGAGGTGAACTGA 432
||.|..||||||||..||..|||.|||||||.|||||||||||||
RBAM_004240 388 AAGACGGAAGAAGAACTGGCCGCTATTTTCAGCGAGGTGAACTGA 432
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