Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00674 and RBAM_004050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_00674___yclN.1.9828.seq
# -bsequence dna-align/RBAM_004050___yclN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00674___yclN-RBAM_004050___yclN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00674___yclN-RBAM_004050___yclN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00674___yclN
# 2: RBAM_004050___yclN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 958
# Identity: 769/958 (80.3%)
# Similarity: 769/958 (80.3%)
# Gaps: 11/958 ( 1.1%)
# Score: 3072.0
#
#
#=======================================
BSNT_00674___ 1 ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGT-CACAT 49
||||||||||||||||||.||.|.|||||.....|.||.|| || .||.|
RBAM_004050__ 1 ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGC-GTGTACTT 49
BSNT_00674___ 50 CTGTATTTATCGGTGTAGAAGATCTGTCGCCGCTTGATCTCTTCGATTTA 99
||.||||||||||||||||||||.||||||||||.|||.|.||..|||||
RBAM_004050__ 50 CTATATTTATCGGTGTAGAAGATTTGTCGCCGCTGGATATTTTTCATTTA 99
BSNT_00674___ 100 AGCAAACAAGAGGC--GTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTG 147
|..|||.||.|||| || ||.|||||||..|||||..|||||||.|||
RBAM_004050__ 100 AATAAAGAACAGGCAGGT--ACATTGTTTGACAGCCGGCTGCCGCGTTTG 147
BSNT_00674___ 148 ATCAGCATTGTCATCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTAT 197
.|.||||||.|||||||.||..|.|||.|||||||||||||.||.||.||
RBAM_004050__ 148 GTGAGCATTATCATCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCAT 197
BSNT_00674___ 198 GCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCGGGCACGA 247
|||||||||||||.|.||.|||||.||.||.||||||||.|||||.||||
RBAM_004050__ 198 GCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCGGGAACGA 247
BSNT_00674___ 248 TGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCC 297
||||||||||.||||||||.||.||.|||||.||..||||.|||||.||.
RBAM_004050__ 248 TGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCA 297
BSNT_00674___ 298 GCCAGTCCTTTAATCAAAATG-CTGGTCGCGTTTGTCTTTGCCCTTGCAG 346
||.|||||..|..|.|||||| || .||||.||.||.||.||..|.||.|
RBAM_004050__ 298 GCGAGTCCGCTTGTGAAAATGTCT-ATCGCTTTCGTTTTCGCGTTGGCGG 346
BSNT_00674___ 347 GAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACC 396
|||||||.|||||.|||||||||||.||.||||||||||||||.||..|.
RBAM_004050__ 347 GAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCG 396
BSNT_00674___ 397 ATCTTTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAAT 446
||.||||||||.||.||||||||||||||.||||||||||||||||||.|
RBAM_004050__ 397 ATTTTTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGT 446
BSNT_00674___ 447 CGCGACATTTATCGCATATAAATATGACTTGATCCAGAATGTGTCATCAT 496
|||.||.|||||||||||||||||.|||.|||||||.||..||||.||.|
RBAM_004050__ 447 CGCCACGTTTATCGCATATAAATACGACCTGATCCAAAACCTGTCGTCCT 496
BSNT_00674___ 497 GGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTT 546
||||||||||.||.|||||..|.|||||.|||||..|.||.||||||.|.
RBAM_004050__ 497 GGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTA 546
BSNT_00674___ 547 TATCTGAGTATTCCGCTCGTCATCATTGCCTATGTGTATGCGGATAAATT 596
|||||||||||.|||||..|.|||||.||.||||||||||||||||||||
RBAM_004050__ 547 TATCTGAGTATCCCGCTTTTGATCATCGCTTATGTGTATGCGGATAAATT 596
BSNT_00674___ 597 CACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCCTGAAGT 646
.||..||||.||.|||||.||.||||||||.|||||.|||||||||||.|
RBAM_004050__ 597 TACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCCTGAAAT 646
BSNT_00674___ 647 ACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCC 696
|||||||.||.||.||.|||||.||.|||||||||||.||.|||.|.||.
RBAM_004050__ 647 ACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCA 696
BSNT_00674___ 697 CTTGTCATTTTGACTGTCGGTATGCTGCCGTTTCTCGGTTTAATCATCCC 746
||.||.||..||||.|||||.||||||||||||||||||||.|||||.||
RBAM_004050__ 697 CTGGTGATCCTGACCGTCGGGATGCTGCCGTTTCTCGGTTTGATCATTCC 746
BSNT_00674___ 747 GAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGC 796
.|||||.||.||||||||||.|||.|||||.||||.||||||||||||.|
RBAM_004050__ 747 TAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTC 796
BSNT_00674___ 797 ATACTGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGC 846
|.||.||.|||.||||.||.||.|||||||||||||||||.||..||||.
RBAM_004050__ 797 ACACCGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGA 846
BSNT_00674___ 847 AGAATCATTATCTTCCCTTATGAAATCTCGATTGGCCTGATGGTCGGAAT 896
||..|.||.||||||||.||.|||||.||.||.||||||||||||||..|
RBAM_004050__ 847 AGGGTGATCATCTTCCCGTACGAAATTTCCATCGGCCTGATGGTCGGTGT 896
BSNT_00674___ 897 CATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATG 946
.||||||||||||||.|||||||.|||||||||||||||||||||.||||
RBAM_004050__ 897 TATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATG 946
BSNT_00674___ 947 CGTAA--- 951
.||.|
RBAM_004050__ 947 AGTCATAA 954
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