Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06059 and RBAM_003930
See
Amino acid alignment /
Visit
BSNT_06059 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence dna-align/BSNT_06059___yxeN.1.9828.seq
# -bsequence dna-align/RBAM_003930___yxeN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06059___yxeN-RBAM_003930___yxeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06059___yxeN-RBAM_003930___yxeN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06059___yxeN
# 2: RBAM_003930___yxeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 676
# Identity: 535/676 (79.1%)
# Similarity: 535/676 (79.1%)
# Gaps: 2/676 ( 0.3%)
# Score: 2099.0
#
#
#=======================================
BSNT_06059___ 1 ATGAACACGATTGATTGGGAATTCATGATATCAGC-GTTCCCGACTTTAA 49
|||||||..||||||||||.|||.|||.|.||||| .|||||| |.||||
RBAM_003930__ 1 ATGAACAGCATTGATTGGGGATTTATGTTTTCAGCTTTTCCCG-CGTTAA 49
BSNT_06059___ 50 TTCAGGCCCTTCCGATCACCTTGTTTATGGCAATAGCAGCTATGATTTTT 99
|..|.|||.|.||||||||.||..|.|||||..|.||.||.|||.|.|||
RBAM_003930__ 50 TCGAAGCCTTGCCGATCACATTACTAATGGCCGTCGCGGCCATGGTATTT 99
BSNT_06059___ 100 GCCATTATCGGAGGACTTATTCTCGCACTCATTACAAAAAACAAAATTCC 149
|||.|.|||||.||.|||||..|.||.||.||.||||||||.....||||
RBAM_003930__ 100 GCCGTGATCGGCGGCCTTATATTAGCGCTTATCACAAAAAATCGTGTTCC 149
BSNT_06059___ 150 AGTGCTTCATCAGCTGTCAAAGCTGTATATATCCTTTTTCCGAGGCGTGC 199
.||||||||.||||||||||||.|||||||.||.||||||||.|||||||
RBAM_003930__ 150 TGTGCTTCACCAGCTGTCAAAGGTGTATATTTCATTTTTCCGGGGCGTGC 199
BSNT_06059___ 200 CGACACTTGTACAGCTGTTCTTAATCTATTACGGGCTGCCGCAGCTATTT 249
||||.||.||.|||||.||||||||.||||||||.|||||.|||||.|||
RBAM_003930__ 200 CGACGCTCGTGCAGCTTTTCTTAATTTATTACGGCCTGCCTCAGCTGTTT 249
BSNT_06059___ 250 CCAGAGATGAGCAAAATGACAGCTCTCACAGCTGCCATCATTGGGTTAAG 299
||.|..||||||||.|||||.||..|.||.||.||.||.||.||||||||
RBAM_003930__ 250 CCCGGAATGAGCAAGATGACGGCGTTAACTGCGGCGATTATCGGGTTAAG 299
BSNT_06059___ 300 CTTAAAAAACGCAGCTTATTTGGCAGAAATCTTCCGGGCCGCCCTCAATT 349
|.|.||.||.||.||.||.|||||.|||||||||||.||.||.|||||.|
RBAM_003930__ 300 CCTGAAGAATGCCGCCTACTTGGCTGAAATCTTCCGCGCGGCGCTCAACT 349
BSNT_06059___ 350 CTGTTGATGACGGGCAGCTGGAGGCGTGCCTGTCTGTCGGTATGACAAAA 399
|.||.|||||.||||||||.||.||.||.|||||||||||.|||||||||
RBAM_003930__ 350 CAGTCGATGAGGGGCAGCTTGAAGCCTGTCTGTCTGTCGGAATGACAAAA 399
BSNT_06059___ 400 TTTCAGGCATACAGACGGATTATTTTGCCGCAAGCGATCCGAAATGCGAT 449
|..|||||.|||||||||||.|||||.||||||||..||.||||.|||.|
RBAM_003930__ 400 TCCCAGGCGTACAGACGGATCATTTTCCCGCAAGCCGTCAGAAACGCGCT 449
BSNT_06059___ 450 TCCGGCAACGGGCAATACATTTATCGGGCTCCTGAAAGAAACGTCACTGG 499
|||.||.|||||.|||||.||||||||.||..|.||||||||.||.||.|
RBAM_003930__ 450 TCCCGCGACGGGAAATACGTTTATCGGCCTGTTAAAAGAAACATCGCTCG 499
BSNT_06059___ 500 CCTTTACATTAGGGGTCATGGAGATGTTCGCCCAAGGGAAGATGTACGCT 549
|||||||||||||.||.|||||.||||||||||||||.||.||||||||.
RBAM_003930__ 500 CCTTTACATTAGGAGTGATGGAAATGTTCGCCCAAGGAAAAATGTACGCA 549
BSNT_06059___ 550 TCAGGAAACCTCAAATATTTTGAGACGTACTTGGCGGTTGCGATCGTCTA 599
|||||.|||||||||||||||||||||||.||.||.||.|||.||.|.||
RBAM_003930__ 550 TCAGGCAACCTCAAATATTTTGAGACGTATTTAGCCGTCGCGGTCATGTA 599
BSNT_06059___ 600 TTGGATTCTTACCATGATCTACAGCATGTTGCAGGACTTGTTTGAACGTG 649
.|||||||||||.||.||.|||||..||.|||||||..||.|.|||||.|
RBAM_003930__ 600 CTGGATTCTTACGATTATTTACAGTGTGCTGCAGGATCTGCTCGAACGGG 649
BSNT_06059___ 650 CCATGAGCAAGCCATACCGGACTTAG 675
|.||.||||||||.||.||.||.|||
RBAM_003930__ 650 CGATCAGCAAGCCTTATCGCACATAG 675
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.