Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00657 and RBAM_003860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00657___yczF.1.9828.seq
# -bsequence dna-align/RBAM_003860___yczF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00657___yczF-RBAM_003860___yczF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00657___yczF-RBAM_003860___yczF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00657___yczF
# 2: RBAM_003860___yczF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 149/250 (59.6%)
# Similarity: 149/250 (59.6%)
# Gaps: 56/250 (22.4%)
# Score: 423.5
#
#
#=======================================
BSNT_00657___ 1 ATGAAGATATTGGGCGTGACCGGAGTCATATTAATTTGTTTATTAGCT-- 48
|||||.|||||||| ||..|||| |||.|||..|.|||
RBAM_003860__ 1 ATGAAAATATTGGG-------GGTTTCAT-----TTTTTTTGCTGGCTGC 38
BSNT_00657___ 49 ----------ATTTCTGTGTTGATGGACATGCTTCAAGGGTTCAGTTTAA 88
|||||.||...|||.||.|||||.|||||.||||||||
RBAM_003860__ 39 CTGTCTGATCATTTCAGTAACGATAGATATGCTGCAAGGTTTCAGTTT-- 86
BSNT_00657___ 89 CAA--AAGCCGTTTATAACAATATGTCCAGC-TTTAAGATGACAACATTT 135
|.| .|||.||..|.|||||..||||| || |||||..||||.||.||.
RBAM_003860__ 87 CTATGGAGCGGTCCAAAACAACCTGTCC-GCTTTTAAATTGACCACCTTC 135
BSNT_00657___ 136 GCGGAATGGGTCGTGCTTTTATTTTTTG------TTTTAGTACTTGTGAG 179
.|.||||||.|..||||.||.||.||.| ||||| .|.||
RBAM_003860__ 136 TCAGAATGGCTGATGCTGTTTTTATTCGCCCTCTTTTTA------ATCAG 179
BSNT_00657___ 180 AGAAATCTACATGATC------TATAAATC-GAAAAAAAAGAACCCCTAG 222
|||| |||||| |||||||| |..||||||||..||..|
RBAM_003860__ 180 AGAA------ATGATCGTTTTATATAAATCAGGTAAAAAAGATGCCTGA- 222
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