Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00644 and RBAM_003800

See Amino acid alignment / Visit BSNT_00644 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence dna-align/BSNT_00644___yclB.1.9828.seq
#    -bsequence dna-align/RBAM_003800___yclB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00644___yclB-RBAM_003800___yclB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00644___yclB-RBAM_003800___yclB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00644___yclB
# 2: RBAM_003800___yclB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 623
# Identity:     482/623 (77.4%)
# Similarity:   482/623 (77.4%)
# Gaps:          10/623 ( 1.6%)
# Score: 1846.0
# 
#
#=======================================

BSNT_00644___      1 ------ATGAAAGCAGAATTCAAGCGTAAAGGAGGGGGCAAAGTGAAACT     44
                           .|||.|.||.|.|||||||||||||||||||.|||..||||.||
RBAM_003800__      1 ATGGTTTTGACACCACATTTCAAGCGTAAAGGAGGGGTCAATATGAAGCT     50

BSNT_00644___     45 CGTTGTCGGAATGACAGGGGCAACAGGGGCCATTTTTGGGGTCAGGCTGC     94
                     |||..||||||||||.|||||||||||.|||||.||.|||.|||||||..
RBAM_003800__     51 CGTCATCGGAATGACCGGGGCAACAGGAGCCATATTCGGGATCAGGCTTT    100

BSNT_00644___     95 TGCAGTGGCTGAAGGCCGCCGGAG-TGGAAACCCATCTCGTTGTGTCTCC    143
                     |..|.|...|.||.|||| ||||| |.|||||||||||.||.||||||||
RBAM_003800__    101 TAGAATATTTAAAAGCCG-CGGAGATCGAAACCCATCTTGTCGTGTCTCC    149

BSNT_00644___    144 TTGGGCAAACGTCACGATCAAACACGAAACAGGCTATACCTTACAAGAAG    193
                     |||||||||.|||||.||.|.|||.|||||.|..|||||.|||.||||.|
RBAM_003800__    150 TTGGGCAAATGTCACCATTACACATGAAACCGATTATACGTTAAAAGATG    199

BSNT_00644___    194 TAGAACAACTGGCCACATACACTTACTCACATAAGGATCAGGCGGCAGCC    243
                     |.||..||||.||..|.|..||.||.||.||.||.||.||.||.||.||.
RBAM_003800__    200 TCGAGAAACTCGCATCCTTTACGTATTCTCACAAAGACCAAGCCGCGGCG    249

BSNT_00644___    244 ATTTCAAGCGGGTCGTTTGATACCGATGGAATGATTGTTGCGCCGTGCAG    293
                     |||||||||||.||||||||.||.||.||.|||||..|.||.||||||||
RBAM_003800__    250 ATTTCAAGCGGCTCGTTTGAAACGGACGGGATGATCATCGCTCCGTGCAG    299

BSNT_00644___    294 CATGAAATCTCTCGCAAGCATTCGCACCGGCATGGCGGATAATCTGCTGA    343
                     |||||||||.||.||||||||.||||||||.|||||.||.||||||||||
RBAM_003800__    300 CATGAAATCACTGGCAAGCATCCGCACCGGAATGGCTGACAATCTGCTGA    349

BSNT_00644___    344 CACGTGCGGCGGATGTCATGCTCAAGGAGAGAAAAAAACTCGTCCTCTTA    393
                     ||.|.||.||.||.|||||..|.||||||.|.||||||||.||.||..|.
RBAM_003800__    350 CAAGGGCAGCTGACGTCATCTTGAAGGAGCGGAAAAAACTTGTGCTGCTG    399

BSNT_00644___    394 ACGAGAGAGACGCCTTTGAACCAAATTCATCTCGAAAATATGCTAGCGCT    443
                     ||.|||||.|||||..|.|.||||||||||.|.|||||||||||||||||
RBAM_003800__    400 ACAAGAGAAACGCCGCTCAGCCAAATTCATTTAGAAAATATGCTAGCGCT    449

BSNT_00644___    444 TACGAAAATGGGTACAATCATTCTTCCTCCGATGCCGGCATTTTATAATC    493
                     |||.|||||||||.|..||||||||||.||||||||||||||||||||..
RBAM_003800__    450 TACAAAAATGGGTTCCGTCATTCTTCCGCCGATGCCGGCATTTTATAACA    499

BSNT_00644___    494 AGCCGAGCAG-CTTAGAGGAAATGGTTGACCATATTGTTTTTAGAACGTT    542
                     ||||| ||.| |.|.||.|||.||.|.|||||||||||.||..|.|||.|
RBAM_003800__    500 AGCCG-GCTGACATGGATGAATTGATAGACCATATTGTGTTCCGGACGCT    548

BSNT_00644___    543 GGACCAATTCGGCATTCGGCTTCCTGAAGCGAAGCGCTGGAATGGGATTG    592
                     .||.||.||||||||.||.||.||.||||||||.||.|||.|.||.||||
RBAM_003800__    549 CGATCAGTTCGGCATCCGTCTGCCGGAAGCGAATCGGTGGTACGGAATTG    598

BSNT_00644___    593 AAAAACAAAAAGGAGGAGCTTGA    615
                     |||||||||||||||||...|||
RBAM_003800__    599 AAAAACAAAAAGGAGGAATCTGA    621


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