Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00644 and RBAM_003800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00644___yclB.1.9828.seq
# -bsequence dna-align/RBAM_003800___yclB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00644___yclB-RBAM_003800___yclB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00644___yclB-RBAM_003800___yclB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00644___yclB
# 2: RBAM_003800___yclB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 623
# Identity: 482/623 (77.4%)
# Similarity: 482/623 (77.4%)
# Gaps: 10/623 ( 1.6%)
# Score: 1846.0
#
#
#=======================================
BSNT_00644___ 1 ------ATGAAAGCAGAATTCAAGCGTAAAGGAGGGGGCAAAGTGAAACT 44
.|||.|.||.|.|||||||||||||||||||.|||..||||.||
RBAM_003800__ 1 ATGGTTTTGACACCACATTTCAAGCGTAAAGGAGGGGTCAATATGAAGCT 50
BSNT_00644___ 45 CGTTGTCGGAATGACAGGGGCAACAGGGGCCATTTTTGGGGTCAGGCTGC 94
|||..||||||||||.|||||||||||.|||||.||.|||.|||||||..
RBAM_003800__ 51 CGTCATCGGAATGACCGGGGCAACAGGAGCCATATTCGGGATCAGGCTTT 100
BSNT_00644___ 95 TGCAGTGGCTGAAGGCCGCCGGAG-TGGAAACCCATCTCGTTGTGTCTCC 143
|..|.|...|.||.|||| ||||| |.|||||||||||.||.||||||||
RBAM_003800__ 101 TAGAATATTTAAAAGCCG-CGGAGATCGAAACCCATCTTGTCGTGTCTCC 149
BSNT_00644___ 144 TTGGGCAAACGTCACGATCAAACACGAAACAGGCTATACCTTACAAGAAG 193
|||||||||.|||||.||.|.|||.|||||.|..|||||.|||.||||.|
RBAM_003800__ 150 TTGGGCAAATGTCACCATTACACATGAAACCGATTATACGTTAAAAGATG 199
BSNT_00644___ 194 TAGAACAACTGGCCACATACACTTACTCACATAAGGATCAGGCGGCAGCC 243
|.||..||||.||..|.|..||.||.||.||.||.||.||.||.||.||.
RBAM_003800__ 200 TCGAGAAACTCGCATCCTTTACGTATTCTCACAAAGACCAAGCCGCGGCG 249
BSNT_00644___ 244 ATTTCAAGCGGGTCGTTTGATACCGATGGAATGATTGTTGCGCCGTGCAG 293
|||||||||||.||||||||.||.||.||.|||||..|.||.||||||||
RBAM_003800__ 250 ATTTCAAGCGGCTCGTTTGAAACGGACGGGATGATCATCGCTCCGTGCAG 299
BSNT_00644___ 294 CATGAAATCTCTCGCAAGCATTCGCACCGGCATGGCGGATAATCTGCTGA 343
|||||||||.||.||||||||.||||||||.|||||.||.||||||||||
RBAM_003800__ 300 CATGAAATCACTGGCAAGCATCCGCACCGGAATGGCTGACAATCTGCTGA 349
BSNT_00644___ 344 CACGTGCGGCGGATGTCATGCTCAAGGAGAGAAAAAAACTCGTCCTCTTA 393
||.|.||.||.||.|||||..|.||||||.|.||||||||.||.||..|.
RBAM_003800__ 350 CAAGGGCAGCTGACGTCATCTTGAAGGAGCGGAAAAAACTTGTGCTGCTG 399
BSNT_00644___ 394 ACGAGAGAGACGCCTTTGAACCAAATTCATCTCGAAAATATGCTAGCGCT 443
||.|||||.|||||..|.|.||||||||||.|.|||||||||||||||||
RBAM_003800__ 400 ACAAGAGAAACGCCGCTCAGCCAAATTCATTTAGAAAATATGCTAGCGCT 449
BSNT_00644___ 444 TACGAAAATGGGTACAATCATTCTTCCTCCGATGCCGGCATTTTATAATC 493
|||.|||||||||.|..||||||||||.||||||||||||||||||||..
RBAM_003800__ 450 TACAAAAATGGGTTCCGTCATTCTTCCGCCGATGCCGGCATTTTATAACA 499
BSNT_00644___ 494 AGCCGAGCAG-CTTAGAGGAAATGGTTGACCATATTGTTTTTAGAACGTT 542
||||| ||.| |.|.||.|||.||.|.|||||||||||.||..|.|||.|
RBAM_003800__ 500 AGCCG-GCTGACATGGATGAATTGATAGACCATATTGTGTTCCGGACGCT 548
BSNT_00644___ 543 GGACCAATTCGGCATTCGGCTTCCTGAAGCGAAGCGCTGGAATGGGATTG 592
.||.||.||||||||.||.||.||.||||||||.||.|||.|.||.||||
RBAM_003800__ 549 CGATCAGTTCGGCATCCGTCTGCCGGAAGCGAATCGGTGGTACGGAATTG 598
BSNT_00644___ 593 AAAAACAAAAAGGAGGAGCTTGA 615
|||||||||||||||||...|||
RBAM_003800__ 599 AAAAACAAAAAGGAGGAATCTGA 621
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