Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00637 and RBAM_003750
See
Amino acid alignment /
Visit
BSNT_00637 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00637___yczE.1.9828.seq
# -bsequence dna-align/RBAM_003750___yczE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00637___yczE-RBAM_003750___yczE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00637___yczE-RBAM_003750___yczE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00637___yczE
# 2: RBAM_003750___yczE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 468/692 (67.6%)
# Similarity: 468/692 (67.6%)
# Gaps: 88/692 (12.7%)
# Score: 1599.5
#
#
#=======================================
BSNT_00637___ 1 ------------------GTGAAGCAAGAA--CTTGTTCTGCGCTGGACA 30
.||||||..||| |||| .||||||||||.
RBAM_003750__ 1 ATGAAAGAAGGGACCTCTTTGAAGCGGGAATTCTTG--ATGCGCTGGACG 48
BSNT_00637___ 31 TTTTATTTTGCCGGTTTGATCATTTTGGCTTTTGGTGTATCCCTGACGAT 80
|||||||||||||||.||.|.||||||.||||.||.|||||..|.||.||
RBAM_003750__ 49 TTTTATTTTGCCGGTCTGTTGATTTTGTCTTTCGGGGTATCGTTAACCAT 98
BSNT_00637___ 81 AGAAGGAAAAGCACTCGGCATTAGTCCGTGGGATGCATTTCATTACAGCC 130
..||||||||||.||||||||.||.||.||||||||.||||||||..|.|
RBAM_003750__ 99 TAAAGGAAAAGCTCTCGGCATCAGCCCTTGGGATGCCTTTCATTATGGGC 148
BSNT_00637___ 131 TGTTTCAGCACTTCGGGCTTACCGTCGGCCAGTGGTCCATCATTATTGGA 180
|.||||||||.|||||||||.|.||||||||.|||||||||.|..|.||.
RBAM_003750__ 149 TTTTTCAGCATTTCGGGCTTTCTGTCGGCCAATGGTCCATCGTGGTCGGC 198
BSNT_00637___ 181 GCGCTCATCGTCGGATTCAC--GTCATTGTTTACGAGAGCTTGGCCGAAA 228
|||.||||.||.|..||.|| ||| ||||.|||||..|....||||||
RBAM_003750__ 199 GCGGTCATTGTGGCTTTAACCTGTC--TGTTCACGAGGACACTCCCGAAA 246
BSNT_00637___ 229 ATTGGGGCCCTCCTGAATATGGTGCTCATTGGTGTATTTATAGATTTTTT 278
||.||.||..||.|.||.||||||||.||.||..|.|||||.|||||.|
RBAM_003750__ 247 ATCGGCGCTATCTTAAACATGGTGCTGATGGGAATGTTTATTGATTTCT- 295
BSNT_00637___ 279 CAATTTC-ATTCTGCCTGCCCCCTCGACCT---ACACAGGCTCGATCAT- 323
|||| .||||||.| ||| ||.||.|||...||.|
RBAM_003750__ 296 ---TTTCGTTTCTGCTT----------CCTGAGACGCACGCTTTTTCCTT 332
BSNT_00637___ 324 ------CGT---CTTCTCTCTAGGCGTGGTGCTGATTGGTTACGGCGTCG 364
||| .||.|||.|.||..||.|||||||.||.|.||||||||
RBAM_003750__ 333 AGCGGCCGTGTGTTTTTCTATCGGATTGCTGCTGATCGGCTGCGGCGTCG 382
BSNT_00637___ 365 GTGTTTATGTATCAGCAGGCCTTGGCGCGGGGCCGCGTGATTCACTGATG 414
||.||||.|||||||||||.||.||||||||.||.||.||.||.||||||
RBAM_003750__ 383 GTATTTACGTATCAGCAGGGCTCGGCGCGGGCCCCCGGGACTCTCTGATG 432
BSNT_00637___ 415 ATGCTGATTACAGAAAAAACCGGCTGGAATGTGCAATGGGTGCGGAACGG 464
||||||||..|.||||||||.||||||||.||||||||||||||||||||
RBAM_003750__ 433 ATGCTGATATCTGAAAAAACGGGCTGGAACGTGCAATGGGTGCGGAACGG 482
BSNT_00637___ 465 CATGGAATTAACCATTTTGTTTGCGGCA---TGGGGCATGGGCGGACCGA 511
|||.||..|.||.||| .||||.||| |||...|||||||||||||
RBAM_003750__ 483 CATTGAGCTGACGATT---CTTGCCGCAGCCTGGATGATGGGCGGACCGA 529
BSNT_00637___ 512 TCGGTTTTGGCACCATTTTGACCGCCATCCTCACCGGACTCATTCTGCGT 561
||||....||.||||||.|.||.||..|..|.||.||.||.|||||||||
RBAM_003750__ 530 TCGGCGCCGGAACCATTATTACGGCTGTTTTGACGGGGCTGATTCTGCGT 579
BSNT_00637___ 562 TTTTCATTGCCGCAGTC----AATCCAGTTGCTGAATTATGCTGTGGCAA 607
|||||.||||||||||| ||.| ||.|.|..||.||..|..|..
RBAM_003750__ 580 TTTTCTTTGCCGCAGTCCTCTAAAC----TGTTAACATACGCGATCTCCG 625
BSNT_00637___ 608 GGCGGACAGCCGCTGTGAAAGCATC-TCCGCCTGTACACTAA 648
||||| |||.| ||| ||.||.|||
RBAM_003750__ 626 GGCGG---------------GCAACGTCC----GTTCATTAA 648
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.