Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00635 and RBAM_003740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00635.1.9828.seq
# -bsequence dna-align/RBAM_003740___sfp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00635-RBAM_003740___sfp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00635-RBAM_003740___sfp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00635
# 2: RBAM_003740___sfp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 495/698 (70.9%)
# Similarity: 495/698 (70.9%)
# Gaps: 46/698 ( 6.6%)
# Score: 1624.5
#
#
#=======================================
BSNT_00635 1 ATGAAGATTTACGGAATTTATATGGACCGCCCGCTTTC-ACAGGAAGAAA 49
|||||.|||||||||.|.|||||||||||||||||||| .|||| .|||.
RBAM_003740__ 1 ATGAAAATTTACGGAGTATATATGGACCGCCCGCTTTCTGCAGG-GGAAG 49
BSNT_00635 50 ATGAACGGTTCATGTCTTTCATATCACCTGAAAAACGGGAGAAATGCCGG 99
|.||.|||.|.|||.|...|.|.||..|.|||||.|||||.|||||||||
RBAM_003740__ 50 AGGATCGGATGATGGCGGCCGTGTCCGCCGAAAAGCGGGAAAAATGCCGG 99
BSNT_00635 100 AGATTTTATCATAAAGAAGATGCTCACCGCACCCTGCTGGGAGATGTGCT 149
.|.|||||.|||||.||.|||||||||||||||.||.|.||.||..||||
RBAM_003740__ 100 CGCTTTTACCATAAGGAGGATGCTCACCGCACCTTGATCGGCGACATGCT 149
BSNT_00635 150 CGTTCGCTCAG-TCATAAGCAGGC--AGTATCAGTTGGAC-AAATCC--- 192
..|.|||.|.| | || ||| ||..|.| ||||| ..||||
RBAM_003740__ 150 GATCCGCACCGCT-----GC-GGCGAAGGCTTA--TGGACTTGATCCGGC 191
BSNT_00635 193 ---GATATCCGCTTCAGCACGCAGGAATACGGGAAGCCGTGCATCCCTGA 239
|||.|| .|||.||...|||||||||||.|||||||.||||||.|.
RBAM_003740__ 192 CGGGATTTC--ATTCGGCGTCCAGGAATACGGAAAGCCGTACATCCCCGC 239
BSNT_00635 240 TCTTCCCGACGCTCATTTCAACATTTCTCACTCCGGCCGCTGGGTCATTG 289
.|||||.|||...||.||.||||||||.||||||||.||||||.||.|
RBAM_003740__ 240 GCTTCCGGACATGCACTTTAACATTTCCCACTCCGGGCGCTGGATCGT-- 287
BSNT_00635 290 GTGCG--TTTGATTCACAGCCGATCGGCATAGATATCGAAAAAACGAAAC 337
||||| .||||||||.|.|||||||||||.|||||.|||||||.|||.|
RBAM_003740__ 288 GTGCGCCGTTGATTCAAAACCGATCGGCATTGATATTGAAAAAATGAAGC 337
BSNT_00635 338 CGATCAGCCTTGAGATCGCCAAGCGCTTCTTTTCAAAAACAGAGTACAGC 387
|...||...||||.||||||||.||.||.|||||....||.||.|||||.
RBAM_003740__ 338 CCGGCACAATTGATATCGCCAAACGGTTTTTTTCGCCGACGGAATACAGT 387
BSNT_00635 388 GACCTTTTAGCAAAAGACAAGGACGAGCAGACAGACTATTTTTATCATCT 437
||.||...|||.|||.||...||..|||||||.||.||||||||.||.||
RBAM_003740__ 388 GATCTGCAAGCGAAACACCCCGATCAGCAGACCGATTATTTTTACCACCT 437
BSNT_00635 438 ATGGTCAATGAAAGAAAGCTTTATCAAACAGGAAGGCAAA-GGCTTATCG 486
.|||||.||||||||||||||||||||.||||..||.||| ||||| ||.
RBAM_003740__ 438 GTGGTCGATGAAAGAAAGCTTTATCAAGCAGGCCGGAAAAGGGCTT-TCC 486
BSNT_00635 487 CTTCCGCTTGATTCCTTTTCA--GTGCGCCTGCACCAGGACGGACAAGTA 534
||.||||||||||| .|||| ||.|||||..|..|.|||||.||.||.
RBAM_003740__ 487 CTGCCGCTTGATTC--ATTCAGCGTCCGCCTTAAAGACGACGGCCATGTG 534
BSNT_00635 535 TCCATTGAGCTTCCGGACAGCCATTCCCCATGCTATATCAAAACGTATGA 584
|||||||||||.||||||.|.|||...||.||.|..|||...||.|||||
RBAM_003740__ 535 TCCATTGAGCTCCCGGACGGACATGAACCTTGTTTCATCCGCACATATGA 584
BSNT_00635 585 GGTCGATCCCGG-CTACAAAATGGCTGTATGCGCCGCACACCCTGATTTC 633
|| ||..|..|| .||.||..||||.||.||.||.||.||.||.|||||.
RBAM_003740__ 585 GG-CGGACGAGGAGTATAAGCTGGCCGTTTGTGCGGCGCATCCCGATTTT 633
BSNT_00635 634 CCCGA--GGAT----ATCACAATAGTCTCGTACGAAGAGCTTTTATAA 675
...|| |||| ||.|.|| ||||.||||||||.||||||
RBAM_003740__ 634 TGTGACGGGATTGAGATGAAAA------CGTATGAAGAGCTGTTATAA 675
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