Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00529 and RBAM_003230

See Amino acid alignment / Visit BSNT_00529 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_00529___opuAB.1.9828.seq
#    -bsequence dna-align/RBAM_003230___opuAB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00529___opuAB-RBAM_003230___opuAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00529___opuAB-RBAM_003230___opuAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00529___opuAB
# 2: RBAM_003230___opuAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 850
# Identity:     718/850 (84.5%)
# Similarity:   718/850 (84.5%)
# Gaps:           2/850 ( 0.2%)
# Score: 3050.0
# 
#
#=======================================

BSNT_00529___      1 ATGGATAGACTGCCTAGAATACCTTTAGCAGATATCATTGACCGTTTTGT     50
                     |||||.|||.||||||||||.||.||||||||||||.|||||||.|||||
RBAM_003230__      1 ATGGACAGATTGCCTAGAATTCCGTTAGCAGATATCGTTGACCGGTTTGT     50

BSNT_00529___     51 TGACTGGATTACGATGACGTTTGGCGGATTCTTCGACGGAATCGCTAACG    100
                     |||||||.||||.||||||||.||.||.|||||.|||||||||.|.||||
RBAM_003230__     51 TGACTGGCTTACCATGACGTTCGGAGGTTTCTTTGACGGAATCTCAAACG    100

BSNT_00529___    101 GATTGGCCGCTTTTGTAAATGGAATTGTCACCGGTCTTGGATTT-ATTCC    149
                     |.|||||||||||.|||||.|..|||||.|.|||| ||||.||| ||.||
RBAM_003230__    101 GTTTGGCCGCTTTCGTAAACGCGATTGTGAGCGGT-TTGGGTTTCATCCC    149

BSNT_00529___    150 ATCTATTTTGTTAACGATTATTTTCGCCGCACTTGCGTGGTGGATCAGTA    199
                     .||||||||.||.||..|||||||.||.||.||.||.|||||||||||||
RBAM_003230__    150 GTCTATTTTATTGACTGTTATTTTTGCAGCTCTCGCTTGGTGGATCAGTA    199

BSNT_00529___    200 CAAGGGGAATTGCGTTATTTACGTTGATTGGATTCCTCCTGATCGATTAT    249
                     |.||.||||||||..|.||||||||.||.||||||||..|.||.||||||
RBAM_003230__    200 CGAGAGGAATTGCACTCTTTACGTTAATCGGATTCCTTGTTATTGATTAT    249

BSNT_00529___    250 TTAGGTTATTGGGACCCAATGCTGCAAACATTGGCGCTTGTGTTGACATC    299
                     ||.||.||||||...||.|||||||||||.|||||||||||..|.|||||
RBAM_003230__    250 TTGGGCTATTGGTCGCCGATGCTGCAAACGTTGGCGCTTGTCGTCACATC    299

BSNT_00529___    300 TGTGATTATTTCGATTGTGGTCGGGGTTCCGATCGGAATTTGGGCGTCTC    349
                     |||..|.|||||.|||.|..||||||||||||||||.||.||||||||||
RBAM_003230__    300 TGTTTTGATTTCCATTATTATCGGGGTTCCGATCGGCATATGGGCGTCTC    349

BSNT_00529___    350 AGAAAGAAACGGTTCGCCGTATTGTAACGCCAATTCTTGATTTAATGCAG    399
                     |||||||||||||.|||||.|||||.||.||.|||||.||||||||||||
RBAM_003230__    350 AGAAAGAAACGGTCCGCCGCATTGTTACACCGATTCTGGATTTAATGCAG    399

BSNT_00529___    400 ACAATGCCTGCTTTCGTATATCTATTGCCGGCGATTTTCTTCTTTAACAT    449
                     ||.|||||.||||||||||||||..||||.|||||||||||||||||.||
RBAM_003230__    400 ACCATGCCGGCTTTCGTATATCTGCTGCCTGCGATTTTCTTCTTTAATAT    449

BSNT_00529___    450 CGGTGTTGTGCCGGGTGTTGTTGCATCTGTTATCTTCGCGATGCCGCCGA    499
                     |||.||||||||.||.||.||.|||||||||||.|||||.|||||.||||
RBAM_003230__    450 CGGGGTTGTGCCAGGCGTCGTGGCATCTGTTATTTTCGCAATGCCTCCGA    499

BSNT_00529___    500 CAATCCGCATGACTGTTCTCGGTATTAAACAAGTGCCGGCGGATCTGATT    549
                     |.|||||||||||.||||||||||||||||||||.|||||.|||.||||.
RBAM_003230__    500 CGATCCGCATGACGGTTCTCGGTATTAAACAAGTTCCGGCTGATTTGATC    549

BSNT_00529___    550 GAAGCAACTGAGGCATTCGGTTCTACAACAGCTCAGCGTTTGTTTAAAGT    599
                     |||||.||.||.|||||||||||.||.||..||||||||.||||.||.||
RBAM_003230__    550 GAAGCGACGGAAGCATTCGGTTCAACGACGTCTCAGCGTCTGTTCAAGGT    599

BSNT_00529___    600 TCAGCTTCCGCTTGCGACAAAAACGATTTTGGCCGGAATTAACCAGAGCA    649
                     .||||||||||||||.||||||||.|||.|.|||||.||||||||.||||
RBAM_003230__    600 ACAGCTTCCGCTTGCCACAAAAACAATTCTTGCCGGTATTAACCAAAGCA    649

BSNT_00529___    650 TCATGCTTGCGTTATCAATGGTTGTTATCGCCGCAATGGTCGGTGCACCG    699
                     ||||||||||.|||||||||||.||||||||.||.|||||||||||.|||
RBAM_003230__    650 TCATGCTTGCTTTATCAATGGTCGTTATCGCGGCCATGGTCGGTGCGCCG    699

BSNT_00529___    700 GGACTTGGTTCTGAAGTATACAGTGCCGTTACACAGCTGAAAACCGGGGT    749
                     ||.||.|||||||||||||||||.|||||.||||||.||||||||||.||
RBAM_003230__    700 GGCCTCGGTTCTGAAGTATACAGCGCCGTGACACAGTTGAAAACCGGTGT    749

BSNT_00529___    750 CGGAGTAGAGGCCGGTATCGCCATCGTTATCGTTGCCATTACGCTGGACC    799
                     ||||||.||.||.||||||||.|||||.|||||.||.|||||.||.||||
RBAM_003230__    750 CGGAGTGGAAGCGGGTATCGCGATCGTCATCGTAGCGATTACACTCGACC    799

BSNT_00529___    800 GTATTACTCAAAATATTAAAGTGAAGAAGAAAAGCAGGGGGAATGCCTGA    849
                     ||||.||.|||||.|||||||||||||||||.||||||||||||||||||
RBAM_003230__    800 GTATCACGCAAAACATTAAAGTGAAGAAGAAGAGCAGGGGGAATGCCTGA    849


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