Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00525 and RBAM_003210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00525___yceI.1.9828.seq
# -bsequence dna-align/RBAM_003210___yceI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00525___yceI-RBAM_003210___yceI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00525___yceI-RBAM_003210___yceI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00525___yceI
# 2: RBAM_003210___yceI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1235
# Identity: 916/1235 (74.2%)
# Similarity: 916/1235 (74.2%)
# Gaps: 64/1235 ( 5.2%)
# Score: 3338.5
#
#
#=======================================
BSNT_00525___ 1 ATGGGAAAACAA-CAGCC-TATATCCCAGCGTAAACTGCTGGGCG-TCGC 47
|||...|||||| |.||| |...||| |||.|||||.|| |||| |.||
RBAM_003210__ 1 ATGAATAAACAACCTGCCGTCACTCC--GCGAAAACTTCT-GGCGATTGC 47
BSNT_00525___ 48 CGGTTTGGGGTGGCTGTTTGATGCAATGGATGTCGGAATATTATCGTTTA 97
|||..||||.||||||||||||||.||||||||||||||.||||||||||
RBAM_003210__ 48 CGGAATGGGCTGGCTGTTTGATGCGATGGATGTCGGAATTTTATCGTTTA 97
BSNT_00525___ 98 TTATCGCCGCGCTCCATGTAGAGTGGAATCTGTCGCCCGAAGAAATGAAA 147
|||||||||||||.||....||.||||||.|..|.|||||..||||||||
RBAM_003210__ 98 TTATCGCCGCGCTTCACACTGATTGGAATTTAACACCCGATCAAATGAAA 147
BSNT_00525___ 148 TGGATCGGAAGCGTCAATTCCATCGGCATGGCTGCGGGTGCGTTTTTGTT 197
||||||||||||||||||||||||||.|||||.|||||.||.|||.|.||
RBAM_003210__ 148 TGGATCGGAAGCGTCAATTCCATCGGTATGGCAGCGGGCGCCTTTGTATT 197
BSNT_00525___ 198 TGGTTTGCTTGCTGATCGAATCGGCCGCAAAAAAGTGTTCATCATCACCC 247
.||..||||.||.||..|.||||||||.|||||||||||.||.|||||.|
RBAM_003210__ 198 CGGAATGCTGGCCGACAGGATCGGCCGGAAAAAAGTGTTTATGATCACGC 247
BSNT_00525___ 248 TTTTATGCTTTTCCATCGGAAGCGGCATTTCCGCTTTTGTGACGAGCTTA 297
|.||||.||||||..|||||||||||||.||||||||.|..|||.|.||.
RBAM_003210__ 248 TGTTATTCTTTTCTGTCGGAAGCGGCATATCCGCTTTCGCAACGGGATTG 297
BSNT_00525___ 298 TCGGCATTTCTAATCCTTCGTTTCGTGATTGGTATGGGACTTGGCGGCGA 347
.|||..|||||.||..|.|||||..||||.||.|||||.||||||||.||
RBAM_003210__ 298 ACGGTTTTTCTCATATTGCGTTTTCTGATCGGAATGGGGCTTGGCGGGGA 347
BSNT_00525___ 348 GCTTCCAGTCGCTTCAACACTCGTTTCGGAAGCGGTTGTGCCTGAAAAGC 397
.||.||.|||||.||.||.|||||.||.||||||...|..||.|||||||
RBAM_003210__ 348 ACTGCCTGTCGCCTCGACGCTCGTGTCAGAAGCGTCCGCTCCCGAAAAGC 397
BSNT_00525___ 398 GGGG-CAGAGTGATTGTGCTTTTGGAAAGCTTTTGGGCCGTGGGCTGGCT 446
|||| |.|| |.||.|||||..|.||.|||||||||||||.|||||||||
RBAM_003210__ 398 GGGGACGGA-TCATCGTGCTGCTTGAGAGCTTTTGGGCCGCGGGCTGGCT 446
BSNT_00525___ 447 CGCAGCGGCCTTGATTTCTTACTTTGTGATACCAAGCTTCGGCTGGCAGG 496
....|||||..|||||||.||||||||.|||||....|||||||||||||
RBAM_003210__ 447 TCTTGCGGCGGTGATTTCCTACTTTGTCATACCGTCATTCGGCTGGCAGG 496
BSNT_00525___ 497 CTGCACTTCTGTTAACTGCGCTGACTGCTTTTTATGCGCTGTACCTGCGG 546
|.||.||.||.|||||.||||||.|.||.|||||||||||||||.|||||
RBAM_003210__ 497 CCGCGCTGCTCTTAACGGCGCTGGCCGCATTTTATGCGCTGTACTTGCGG 546
BSNT_00525___ 547 ACGAGTCTGCCTGATT---CGCCGAAATATGAATCGCTTTCTGCC----- 588
|..||.||.||.||.| ||.||.|..|.|.|| ||||
RBAM_003210__ 547 AGAAGCCTTCCGGAATCACCGGCGCACCAGGCAT-------TGCCGCAGA 589
BSNT_00525___ 589 -AAAAA------GAGGTCGGTGTGGGAGAATGTAAAAAGCGTCTGGGCAA 631
||||| |.||.|.| |.||| |||.||||||.|.|
RBAM_003210__ 590 AAAAAAGCATACGCGGGCAG-GCGGG----------AAGTGTCTGGACGA 628
BSNT_00525___ 632 GACAGTATATACGGCCGACCGTGATGCTGTCGCTCGTTTGGTTCTGTGTG 681
.||.||||||.|..|||||.|||.|||||||..|||||||||||||.||.
RBAM_003210__ 629 AACCGTATATCCAACCGACGGTGCTGCTGTCTGTCGTTTGGTTCTGCGTC 678
BSNT_00525___ 682 GTGTTTTCTTATTACGGCATGTTCCTATGGCTGCCGAGTGTCATGCTGCT 731
||.|||||.||||||||||||||..|||||||||||||.||.||||||.|
RBAM_003210__ 679 GTCTTTTCATATTACGGCATGTTTTTATGGCTGCCGAGCGTGATGCTGAT 728
BSNT_00525___ 732 GAAAGGCTTCAGCATGATTCAAAGCTTTGAATATGTCCTGCTGATGACGC 781
||||||||.||||||||||.|.|||||.|||||.|||||.||||||||.|
RBAM_003210__ 729 GAAAGGCTACAGCATGATTGAGAGCTTCGAATACGTCCTTCTGATGACAC 778
BSNT_00525___ 782 TTGCTCAGCTACCGGGCTATTTCTCTGCCGCATGGCTGATTGAAAAAGCG 831
||||.|||||.||.||.|||||||||||.||.||||||||.|||||||||
RBAM_003210__ 779 TTGCCCAGCTTCCCGGATATTTCTCTGCGGCGTGGCTGATCGAAAAAGCG 828
BSNT_00525___ 832 GGCCGAAAGTGGATACTCGTCATTTACTTGATTGGTACAGCAGGAAGCGC 881
||.||.|||...||..|.|||||.||.|||.|.||.||.||.||.|||||
RBAM_003210__ 829 GGGCGGAAGACCATCTTAGTCATCTATTTGCTCGGAACGGCGGGCAGCGC 878
BSNT_00525___ 882 CTATTTCTTCGGAACGGCGGATTCCTTAAGTC--TTCTGCTTACGGCTGG 929
.|||||||||||..|..|||||||.|| |.| |.|||||.||.||.||
RBAM_003210__ 879 TTATTTCTTCGGTGCCTCGGATTCATT--GGCCATGCTGCTCACAGCGGG 926
BSNT_00525___ 930 AATGCTGTTATCGTTTTTCAACCTCGGTGCATGGGGCGTGCTGTATGCGT 979
.||||||.|.||.||.|||||.|||||.||||||||||||||.||.||.|
RBAM_003210__ 927 CATGCTGCTGTCCTTCTTCAATCTCGGCGCATGGGGCGTGCTTTACGCCT 976
BSNT_00525___ 980 ATACCCCGGAGCAATACCCGACTGCGATTCGAGCAACAGGTTCAGGAACG 1029
||||.||||||||.||.||..|.||||||||.||.||.|||||.||.||.
RBAM_003210__ 977 ATACACCGGAGCAGTATCCTGCGGCGATTCGTGCGACCGGTTCCGGCACA 1026
BSNT_00525___ 1030 ACAGCAGCGTTTGGAAGAATCGGCGGCTTCTTCGGGCCTTTGCTCGTTGG 1079
||.||.|||.|.||.||||||||||||.|.|||||.||..|.||.||.||
RBAM_003210__ 1027 ACGGCGGCGGTCGGCAGAATCGGCGGCATTTTCGGTCCGCTTCTTGTCGG 1076
BSNT_00525___ 1080 AACGCTCGCAGCCCGTCATTTTTCGTTTTCGGTCATCTTTTCAATCTTTT 1129
|.||||.||||||||..|..||||||||.|.||.||.||..|..||||||
RBAM_003210__ 1077 ATCGCTTGCAGCCCGGAACGTTTCGTTTACAGTGATTTTCGCCGTCTTTT 1126
BSNT_00525___ 1130 GCATTGCAATCTTACTCGCGGTTGCTTGT-------ATTTTGATTATGGG 1172
|....||.|||.| |.|||| .|| |||.|.|||.|.||
RBAM_003210__ 1127 GTGCGGCCATCCT------GATTGC-CGTCATCACCATTATTATTCTCGG 1169
BSNT_00525___ 1173 GAAAGAAACGAAACAAACTGAGCTAG---AATAG- 1203
.||||||||||||||.||.|||||.| ||| |
RBAM_003210__ 1170 AAAAGAAACGAAACAGACAGAGCTTGCGCAAT-GA 1203
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