Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00520 and RBAM_003200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00520___yceH.1.9828.seq
# -bsequence dna-align/RBAM_003200___yceH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00520___yceH-RBAM_003200___yceH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00520___yceH-RBAM_003200___yceH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00520___yceH
# 2: RBAM_003200___yceH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1092
# Identity: 916/1092 (83.9%)
# Similarity: 916/1092 (83.9%)
# Gaps: 3/1092 ( 0.3%)
# Score: 3877.0
#
#
#=======================================
BSNT_00520___ 1 ATGACAACAGAAAATCAAAATCCGCTTGTTCTCGATAAAAATGAAGAGAT 50
||| ||||||||||||||||||||||||||.|||||||||||||||||
RBAM_003200__ 1 ATG---ACAGAAAATCAAAATCCGCTTGTTCTTGATAAAAATGAAGAGAT 47
BSNT_00520___ 51 TTCCCAGCAAAAAGCTGACGATATCCGTCTTCAGCTCCGTCAGGAACCAG 100
|||..|.||||||||.||.||.|||.|..|.|||||.||.||.||.||.|
RBAM_003200__ 48 TTCTGAACAAAAAGCAGATGACATCAGGGTGCAGCTGCGCCAAGACCCTG 97
BSNT_00520___ 101 AAGTGAAGCGGCTTGCTCAACAAATTGACGTTAAAAACCAAATGGAGCTG 150
|.|||.||||..||.|.||.||.||||||||.||||||||||||||||||
RBAM_003200__ 98 AGGTGCAGCGCATTTCACAGCAGATTGACGTGAAAAACCAAATGGAGCTG 147
BSNT_00520___ 151 CTTGAGTACGGCAAGGAGCCGGCCGTTGAAATATCCAAGTTCTCTGACCG 200
|||||||||||.||.||.|||||.||||||||.||.||||||||.|||||
RBAM_003200__ 148 CTTGAGTACGGAAAAGAACCGGCAGTTGAAATCTCGAAGTTCTCCGACCG 197
BSNT_00520___ 201 CATCTTGGGGATGATGAAAACAACAAGTGTGACAGACTCCGGCACAATGC 250
||||||....||||||||||||||||||||.||.||.||.||||||||||
RBAM_003200__ 198 CATCTTAAATATGATGAAAACAACAAGTGTCACGGATTCAGGCACAATGC 247
BSNT_00520___ 251 TGACTCAGCTTGGGAAAATCATGGACCGCTTTGACAAAAATGATTTTGAT 300
||||.|||||.||.||||||||||||||.|||||||||||||||||.|||
RBAM_003200__ 248 TGACGCAGCTCGGAAAAATCATGGACCGTTTTGACAAAAATGATTTCGAT 297
BSNT_00520___ 301 GAGCCAAAGGGATTAATGGCGAAAATTTTCAAACGCGGCGGCAGCATGAT 350
||.|||||.|||||..|.||.|||||.||||||||||||..|||||||||
RBAM_003200__ 298 GAACCAAAAGGATTTCTCGCTAAAATGTTCAAACGCGGCAACAGCATGAT 347
BSNT_00520___ 351 TGAAAAAATCTTTAAAAAGTATCAGACGCTTGGCGGAGAGATTGAAAAAA 400
||||||.||.|||.|||||||.|..||.||.||||||||.||||||||||
RBAM_003200__ 348 TGAAAAGATTTTTCAAAAGTACCGCACCCTGGGCGGAGAAATTGAAAAAA 397
BSNT_00520___ 401 TCCACGTTGAGATTTCAAAATACAAAGATGAGATGACGAAGACGAACTAC 450
|||||||.||.||||||||||||||||||||.|||.|.|||||||||.|.
RBAM_003200__ 398 TCCACGTCGAAATTTCAAAATACAAAGATGAAATGGCAAAGACGAACCAT 447
BSNT_00520___ 451 ACGCTCGATGAAATGTATGAAAACAATATCAAATACTATATGGAGCTTGA 500
|||||.||.||.||||||||||||||.||.||.|||||.|||||||||||
RBAM_003200__ 448 ACGCTGGAAGAGATGTATGAAAACAACATTAACTACTACATGGAGCTTGA 497
BSNT_00520___ 501 AAAATACGTCGTTGCCGGGCAGATGAAACTGGAAGAGATGCAGTCGATCC 550
|||.||.||||||||||||||||||||.||.||.||.||||||.||.||.
RBAM_003200__ 498 AAAGTATGTCGTTGCCGGGCAGATGAAGCTTGAGGAAATGCAGGCGCTCA 547
BSNT_00520___ 551 TTCCTTCATATGAGGAAAAAGCGGCAAGCGGAAACCAGCTGGCGCAAATG 600
|||||||.|||||.||||||||||||.|||||||||||||.||.||||||
RBAM_003200__ 548 TTCCTTCTTATGAAGAAAAAGCGGCAGGCGGAAACCAGCTCGCTCAAATG 597
BSNT_00520___ 601 CAGCTCGATACATTGCGCAACGGCATTCAGGCGCTTGAGGAACGGGTGTA 650
|||||.|||||..||||..||||..|||||||||||||||||||.||.||
RBAM_003200__ 598 CAGCTTGATACGCTGCGTGACGGGCTTCAGGCGCTTGAGGAACGTGTCTA 647
BSNT_00520___ 651 TGATCTGGACATGGCACGGATGGTGGCGCTTCAAACCGCACCTCAAATCC 700
||||.|.||.|||||.||||||||.|||||.|||||.||.||.||.||||
RBAM_003200__ 648 TGATTTAGATATGGCGCGGATGGTAGCGCTGCAAACGGCGCCGCAGATCC 697
BSNT_00520___ 701 GTCTCCTGCAGCGAGGAAATGCAAAGCTGATCGGGAAAATCAACTCCGCG 750
|.|||||.|||||.||||||.|.|||||.||||||||||||||.|||||.
RBAM_003200__ 698 GCCTCCTTCAGCGCGGAAATACGAAGCTCATCGGGAAAATCAATTCCGCT 747
BSNT_00520___ 751 TTTATCATTACCATTCCGATTTTCAAAAACGGCATTATTCAGGCTGTTAC 800
||..|||||||.|||||||||||||||||||||||.||||||||||||||
RBAM_003200__ 748 TTCGTCATTACGATTCCGATTTTCAAAAACGGCATCATTCAGGCTGTTAC 797
BSNT_00520___ 801 GGTGAAACGGCAAAAGCTTGTGGCTGATTCCATGAGCGAGCTTGACCGCC 850
.||.||||||||||||||||||||||||||.|||||||||||.|||||||
RBAM_003200__ 798 AGTCAAACGGCAAAAGCTTGTGGCTGATTCAATGAGCGAGCTGGACCGCC 847
BSNT_00520___ 851 GGACAAACGAGATGCTGAAACGAAATGCTGAAAACATCTCGAGCCAAAGT 900
|.||.||.||.||||||||.|||||.||||||||.||.||.|.||||||.
RBAM_003200__ 848 GCACGAATGAAATGCTGAAGCGAAACGCTGAAAATATTTCAAACCAAAGC 897
BSNT_00520___ 901 GTTGAAATTGCCAGAATGGCCGGCAGACCGAGCATAGATATTGAAACGAT 950
||.|||||||||.|.|||||.|||.|.|||||.||.||.|||||.|||||
RBAM_003200__ 898 GTGGAAATTGCCCGTATGGCAGGCCGTCCGAGTATTGACATTGAGACGAT 947
BSNT_00520___ 951 CGAATCGTCTTGGAACACGATTGTCAGCGGCATGCAGGAAACAAAACAAA 1000
.|||.||||||||||.||||||||||||||.|||||||||||.|||||.|
RBAM_003200__ 948 TGAAACGTCTTGGAATACGATTGTCAGCGGTATGCAGGAAACGAAACAGA 997
BSNT_00520___ 1001 TCGAGGAAGAAAACAAACGCCTCCGCGAAGACGGCGCGAGACGAATTGCA 1050
||||.||.||.||||.|||..||.|.||||||||.||||.|||.|||..|
RBAM_003200__ 998 TCGAAGAGGAGAACAGACGTATCAGAGAAGACGGAGCGAAACGGATTCAA 1047
BSNT_00520___ 1051 CAGCTTCAGGATAATATTAAAAAAGCAGCATTGCAGCAATAA 1092
|||||||||||||||||||||||.||||..||..||.|.|||
RBAM_003200__ 1048 CAGCTTCAGGATAATATTAAAAACGCAGTCTTAAAGAATTAA 1089
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