Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00515 and RBAM_003170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_00515___yceE.1.9828.seq
# -bsequence dna-align/RBAM_003170___yceE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00515___yceE-RBAM_003170___yceE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00515___yceE-RBAM_003170___yceE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00515___yceE
# 2: RBAM_003170___yceE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity: 482/580 (83.1%)
# Similarity: 482/580 (83.1%)
# Gaps: 2/580 ( 0.3%)
# Score: 2006.0
#
#
#=======================================
BSNT_00515___ 1 ATGGCCATTCAATTATCAAAAGGACAGCGCATTGATTTAACAAAAACAAA 50
|||||.||||||||..|.|||||||||||..|||||.|.||||||||.||
RBAM_003170__ 1 ATGGCTATTCAATTGGCGAAAGGACAGCGTGTTGATCTGACAAAAACGAA 50
BSNT_00515___ 51 TCCGGGACTGACAAAAGCGGTGATCGGCTTAGGCTGGGATACAAACAAGT 100
.||.||.||.|||||||||||||||||.||||||||||||||.|||||||
RBAM_003170__ 51 CCCCGGCCTTACAAAAGCGGTGATCGGTTTAGGCTGGGATACGAACAAGT 100
BSNT_00515___ 101 ACTCCGGCGGACACGATTTTGACCTGGATGCTTCGGCCTTTTTAGTTGAT 150
|||||||.||.||.||.||||||||.||.||.|||||.|||.|.||.|||
RBAM_003170__ 101 ACTCCGGAGGGCATGACTTTGACCTTGACGCGTCGGCTTTTCTTGTCGAT 150
BSNT_00515___ 151 GCGCATGATAACTGCGTAAATGATCTCGATTTCGTCTTCTATAATAACCT 200
||.|||||.|||||.|||||||||||.|||||.||.|||||.||||||||
RBAM_003170__ 151 GCCCATGACAACTGTGTAAATGATCTTGATTTTGTTTTCTACAATAACCT 200
BSNT_00515___ 201 TGAACATCCGAGCGGCGGTGTCATCCATACGGGTGACAACCGCACGGGTG 250
.|||||.||.|||||.||.||||||||||||||.||||||||.|||||.|
RBAM_003170__ 201 GGAACACCCAAGCGGGGGCGTCATCCATACGGGAGACAACCGGACGGGCG 250
BSNT_00515___ 251 AGGGCGACGGAGATGATGAGCAGATTATCGTTGATTTCTCAAAAATCCCT 300
|||||||.|||||.|||||.||.||||||||.||.|||||||||||.||.
RBAM_003170__ 251 AGGGCGAGGGAGACGATGAACAAATTATCGTCGACTTCTCAAAAATACCC 300
BSNT_00515___ 301 GCTCACATTGAGAAAATCGGCATCACAGTGACCATTCACGACGCTGAAGC 350
||..|.|||||.||.|||||||||||.||.||.|||||.||.||.|||||
RBAM_003170__ 301 GCAAATATTGAAAAGATCGGCATCACCGTCACGATTCATGATGCGGAAGC 350
BSNT_00515___ 351 ACGCAGCCAAAACTTTGGACAAGTTTCCAATGCATTTGTCCGCGTTGTGG 400
.|||.|||||||.||.|||||||||||.|||||.||.||.|||||.||.|
RBAM_003170__ 351 GCGCGGCCAAAATTTCGGACAAGTTTCGAATGCGTTCGTGCGCGTCGTCG 400
BSNT_00515___ 401 ATGAAGAAACGCAGAATGAGCTTCTTCGCTTCGATTTGGGAGAAGACTTC 450
|||||.|.|..||||||||.||.|||||.||||||||.||||||||||||
RBAM_003170__ 401 ATGAAAACAGCCAGAATGAACTGCTTCGTTTCGATTTAGGAGAAGACTTC 450
BSNT_00515___ 451 TCCATTGAAACAGCTGTTGTCGTTTGTGAGCTTTACAGACACGGCGGC-G 499
||.||||||||.||.|||||||||||||||||||||.|.||.|| ||| |
RBAM_003170__ 451 TCGATTGAAACGGCGGTTGTCGTTTGTGAGCTTTACCGCCATGG-GGCTG 499
BSNT_00515___ 500 AGTGGAAATTCAATGCGATCGGCAGCGGATTTTCCGGCGGGCTGGCTGCA 549
|||||||.||.||.||.|||||||||||.|||||||||||.|||||..||
RBAM_003170__ 500 AGTGGAAGTTTAACGCCATCGGCAGCGGGTTTTCCGGCGGTCTGGCATCA 549
BSNT_00515___ 550 TTGTGCCGGAATTACGGTTTGCAAGTGTAA 579
.|.||||||||||||||.|||||.||||||
RBAM_003170__ 550 CTTTGCCGGAATTACGGCTTGCAGGTGTAA 579
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