Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00512 and RBAM_003150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_00512___yceC.1.9828.seq
# -bsequence dna-align/RBAM_003150___yceC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00512___yceC-RBAM_003150___yceC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00512___yceC-RBAM_003150___yceC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00512___yceC
# 2: RBAM_003150___yceC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 607
# Identity: 473/607 (77.9%)
# Similarity: 473/607 (77.9%)
# Gaps: 17/607 ( 2.8%)
# Score: 1831.5
#
#
#=======================================
BSNT_00512___ 1 GTGGCAATTTCTTTAGAAAAAGGTCAACGAATTGATTTAACAAAAGGAAA 50
.||||.||.||||||.|||||||.||.||.||||||||||||||||||||
RBAM_003150__ 1 ATGGCGATCTCTTTACAAAAAGGACAGCGGATTGATTTAACAAAAGGAAA 50
BSNT_00512___ 51 AGCCGGTCTGTCAAAATTGATGGTCGGTCTCGGCTGGGACCCAGTGTCCT 100
||||||||||||||||.||.|||||||.||||||||||||||.||.||.|
RBAM_003150__ 51 AGCCGGTCTGTCAAAACTGCTGGTCGGACTCGGCTGGGACCCTGTATCAT 100
BSNT_00512___ 101 CAGGCGGAGGATTCTTCAGCAAACTGCTTGGCGGAGGCGGTCCGAATATC 150
| |||.||.||.|||.|.||.|||.|.||||||||||||.|.||||||
RBAM_003150__ 101 C---CGGGGGCTTTTTCGGAAAGCTGTTCGGCGGAGGCGGTGCCAATATC 147
BSNT_00512___ 151 GACTGTGATGCTTCAGTGCTGATGCTGGAAAACGGAAAATTCACCGAAAA 200
||||||||.|||||.||.||||||||.|||||.|..|||.|.||.||.|.
RBAM_003150__ 148 GACTGTGACGCTTCCGTACTGATGCTTGAAAATGATAAAATGACAGACAG 197
BSNT_00512___ 201 GAAAAATCTGATTTATTTCGGCAACCTGAAAAGCCGCTGCGGCGGTGTAC 250
.|||||..|.||.||||||||.||.|||||||||||.|||||||||||
RBAM_003150__ 198 TAAAAACGTCATCTATTTCGGTAATCTGAAAAGCCGATGCGGCGGTGT-- 245
BSNT_00512___ 251 AGCATACA----GGCGACAACCTGACGGGTGACGGTGCGGGCGATGACGA 296
|.|||| ||.||||||||||||||.||.||.|..||||||||.||
RBAM_003150__ 246 --CGTACACACGGGTGACAACCTGACGGGAGAAGGCGACGGCGATGATGA 293
BSNT_00512___ 297 GCAAATTATGATAGATTTAGATAAAGTGCCTGGAAACATCGATAAGCTTG 346
.||||||.|.||.|||||.|..|||||.||.|...|.||..||||.||||
RBAM_003150__ 294 ACAAATTCTCATCGATTTGGCGAAAGTCCCCGCTCAGATTAATAAACTTG 343
BSNT_00512___ 347 TATTTGTAGTGAACATTTACGATTGTGTCAGAAGAAAACAAGATTTCGGC 396
|.|||||.||.||.||||||||.||.||||||.|||||||.||.||||||
RBAM_003150__ 344 TGTTTGTCGTCAATATTTACGACTGCGTCAGACGAAAACAGGACTTCGGC 393
BSNT_00512___ 397 ATGATTCAAAATGCGTTTATCCGCGTAGTTGATCAATCTAATCACGAGGA 446
|||||||||||.|||||.||||||||.||||||||..||||.|.|||.||
RBAM_003150__ 394 ATGATTCAAAACGCGTTCATCCGCGTCGTTGATCAGGCTAACCGCGAAGA 443
BSNT_00512___ 447 AATGCTCAAGTACAATTTGAGAGACAATTACGCCGGCAGAACAAGCCTGA 496
|.||.|.|..||||||||.|||||.||.||..|.||||||||.|||||||
RBAM_003150__ 444 ACTGGTGACTTACAATTTAAGAGATAACTATTCAGGCAGAACGAGCCTGA 493
BSNT_00512___ 497 TTACAGCAGAAATCTACCGC-AG--CGGCAGTGAGTGGAAGTTTGCAGCG 543
|..|.||.|||||||||||| || |||| ||||||||.||.||.|||
RBAM_003150__ 494 TCGCGGCTGAAATCTACCGCGAGGACGGC---GAGTGGAAATTCGCTGCG 540
BSNT_00512___ 544 ATTGGTGAAGGCATGAACGATACGAGATTAGAAGATATTATCAGCCGATA 593
||.||||||||||..||||||||||.|.|.|..|||||..|.|.||||||
RBAM_003150__ 541 ATAGGTGAAGGCACAAACGATACGAAAATCGGCGATATCGTTAACCGATA 590
BSNT_00512___ 594 CGTATAA 600
||..|||
RBAM_003150__ 591 CGCCTAA 597
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