Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00944 and RBAM_002870
See
Amino acid alignment /
Visit
BSNT_00944 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_00944___ydfN.1.9828.seq
# -bsequence dna-align/RBAM_002870___ydfN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00944___ydfN-RBAM_002870___ydfN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00944___ydfN-RBAM_002870___ydfN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00944___ydfN
# 2: RBAM_002870___ydfN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 558/621 (89.9%)
# Similarity: 558/621 (89.9%)
# Gaps: 0/621 ( 0.0%)
# Score: 2538.0
#
#
#=======================================
BSNT_00944___ 1 ATGGCTGAATTTATACAGTTAGTCAATGAAAGACGATCTGCAAGCAATTT 50
||||||||||||.|||||.||||.|||||||||.|||||||||||||.||
RBAM_002870__ 1 ATGGCTGAATTTGTACAGCTAGTGAATGAAAGAAGATCTGCAAGCAACTT 50
BSNT_00944___ 51 TCTTTCAGGTCATCCAATCACAAAAGAAGACCTCAATGAGATGTTTGATT 100
||||.|||..|||||||||||||.|||.||.|||||.||.||||||||.|
RBAM_002870__ 51 TCTTCCAGAACATCCAATCACAAGAGATGAACTCAACGAAATGTTTGAAT 100
BSNT_00944___ 101 TGGTTGCATTGGCGCCATCGGCTTTTAATTTGCAGCATACAAAATATGTG 150
|||||||.|||||.|||||.|||||||||||||||||.||||||||||||
RBAM_002870__ 101 TGGTTGCGTTGGCTCCATCAGCTTTTAATTTGCAGCACACAAAATATGTG 150
BSNT_00944___ 151 GCGGTTCTTGACCAGGACGTAAAGGAAAAGCTGAAGCAGGCCGCAAATGG 200
.||||||||||||.|||.|||||.|||||||||||.|||||||||||.||
RBAM_002870__ 151 ACGGTTCTTGACCCGGATGTAAAAGAAAAGCTGAAACAGGCCGCAAACGG 200
BSNT_00944___ 201 ACAATATAAAGTGGTTAGCTCTTCTGCGGTTCTCTTGGTATTAGGGGATA 250
|||||||||||||.|||||||.||.||.|||||.|||||.||||||||||
RBAM_002870__ 201 ACAATATAAAGTGTTTAGCTCATCAGCTGTTCTTTTGGTTTTAGGGGATA 250
BSNT_00944___ 251 AGCAGGCATATCAACAAGCGGCTGATATCTATGAAGGTTTAAAGGTATTG 300
|||||||||||||.|||||||||||.|||||||||||.||.|||.|..||
RBAM_002870__ 251 AGCAGGCATATCAGCAAGCGGCTGACATCTATGAAGGATTGAAGATGCTG 300
BSNT_00944___ 301 GGGATATTAAATAAGCAAGAGTATGACCACATGGTGCAAGACACCGTTTC 350
|||.||||||||||.|||||||||||.||||||||.||||||||||||||
RBAM_002870__ 301 GGGGTATTAAATAAACAAGAGTATGATCACATGGTTCAAGACACCGTTTC 350
BSNT_00944___ 351 GTTTTATGAAAACAGGGGAGAACAATTTAAGAGAGATGAGGCGATAAGGA 400
|||||||||||||||||||||||.||||||||||||||||||||||||.|
RBAM_002870__ 351 GTTTTATGAAAACAGGGGAGAACCATTTAAGAGAGATGAGGCGATAAGAA 400
BSNT_00944___ 401 ATGCTTCACTTTCTGCGATGATGTTTATGCTGAGTGCTAAGGAAAAAGGC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002870__ 401 ATGCTTCACTTTCTGCGATGATGTTTATGCTGAGTGCTAAGGAAAAAGGC 450
BSNT_00944___ 451 TGGGATACCTGCCCGATGATCGGCTTTGATGCGGAAGCCGTAAAACGGAT 500
|||||.|||||.||||||||.||.||||||||.||||||||.||||.|||
RBAM_002870__ 451 TGGGACACCTGTCCGATGATAGGGTTTGATGCTGAAGCCGTGAAACAGAT 500
BSNT_00944___ 501 TTTGAACATAGACGACCAATTTGAGGTTGTCATGATGATTACGATTGGAA 550
||||||.|||||.||.|||||||||||.||||||||||||||.||.||.|
RBAM_002870__ 501 TTTGAATATAGATGATCAATTTGAGGTCGTCATGATGATTACAATCGGGA 550
BSNT_00944___ 551 AAGAAAAAACAGAGAGCAGAAGACCGCGCGGCTACCGGAAGCCTGTGAAT 600
|||||||||.|||.||||||||.||||||||||||||.||||||||||||
RBAM_002870__ 551 AAGAAAAAATAGAAAGCAGAAGGCCGCGCGGCTACCGAAAGCCTGTGAAT 600
BSNT_00944___ 601 GAGTTTGTTGAGTATATGTAA 621
||||||||.||||||||.|||
RBAM_002870__ 601 GAGTTTGTGGAGTATATTTAA 621
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.