Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00427 and RBAM_002780

See Amino acid alignment / Visit BSNT_00427 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence dna-align/BSNT_00427___mmuM.1.9828.seq
#    -bsequence dna-align/RBAM_002780___mmuM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00427___mmuM-RBAM_002780___mmuM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00427___mmuM-RBAM_002780___mmuM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00427___mmuM
# 2: RBAM_002780___mmuM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity:     704/977 (72.1%)
# Similarity:   704/977 (72.1%)
# Gaps:          58/977 ( 5.9%)
# Score: 2479.0
# 
#
#=======================================

BSNT_00427___      1 ATGAATCCTATCCAACACATATTAGATACATACCCGCTTATTGTGCTAGA     50
                     ||||||||.||...|||.||||||.||..|||||||.||||..|..||||
RBAM_002780__      1 ATGAATCCCATTACACAAATATTAAATGAATACCCGGTTATGATCATAGA     50

BSNT_00427___     51 CGGCGCCATGGCGACCGAGCTTGAACGCAAGGGCTGTAATTTGAATGACA    100
                     ||||||.|||||.|||||||||||.||.|.|||||||.||||..|||||.
RBAM_002780__     51 CGGCGCGATGGCAACCGAGCTTGAGCGGATGGGCTGTGATTTACATGACG    100

BSNT_00427___    101 GTCTGTGGTCGGCAAAAATCCTGATGGAAGA-GCCAAATCTGATTAAACA    149
                     .||||||||||||.|||||.||..||| ||| ||||.|.|||||.|||||
RBAM_002780__    101 ATCTGTGGTCGGCCAAAATTCTTTTGG-AGAGGCCAGAACTGATCAAACA    149

BSNT_00427___    150 AGTACATACTGATTATTTCGCGGCAGGCGCCGATTGTGCAATCACTGCCA    199
                     .||.|||.|.||.|||||.||.||.|||||.|||||.||.|||||.||||
RBAM_002780__    150 GGTGCATGCAGAATATTTTGCCGCCGGCGCTGATTGCGCGATCACCGCCA    199

BSNT_00427___    200 GCTATCAGTCTACATTTGAAGGCTTTGCCGCACGCGGGCTGAGCGAAGCG    249
                     |.|||||.||.|||.|||||||.|||||.||.|||||..|....|||.|.
RBAM_002780__    200 GTTATCAATCGACAATTGAAGGATTTGCAGCGCGCGGCATCCCGGAAACC    249

BSNT_00427___    250 GAAGCACGCCGGCTCATCGAGTTGTCCGTCAG-CATC----------GCA    288
                     ||.||....||.|||||           |||| ||||          ||.
RBAM_002780__    250 GATGCGATACGTCTCAT-----------TCAGACATCTGTTGAACTTGCC    288

BSNT_00427___    289 GCTGAAGCACGTGATGAATTTTGGTCGCTTGAAGAGAACCGTTTGAATCG    338
                     ||..|||||||.||||||||||||.|||.||||||.||||||||..|.||
RBAM_002780__    289 GCACAAGCACGCGATGAATTTTGGGCGCATGAAGAAAACCGTTTACACCG    338

BSNT_00427___    339 GCCAAAACCGATCATTGCGGCTTCTGTAGGCCCTTATGGCGCTTATCTTG    388
                     |||.|||||..|..|.||.||||||.|.||.|||||.|||||....||.|
RBAM_002780__    339 GCCCAAACCTTTGGTCGCCGCTTCTATCGGGCCTTACGGCGCGAGCCTCG    388

BSNT_00427___    389 CAGACGGGTCTGAGTATCGCGGCAACTACGCAATATCAGAAGATGAACTG    438
                     |.|||||.||.||.||||||||..|.||||.|.|..|.||.|||||.|||
RBAM_002780__    389 CTGACGGCTCAGAATATCGCGGGCATTACGGACTGACGGAGGATGAGCTG    438

BSNT_00427___    439 ATTGAATTTCATCGCCCCCGGATGAAGGCGCTGATTGAAGCCGGAGCTGA    488
                     ||....|||||.||||||||||||||.||.||.||.|||.||||.||.||
RBAM_002780__    439 ATCAGCTTTCACCGCCCCCGGATGAAAGCCCTTATAGAATCCGGCGCCGA    488

BSNT_00427___    489 TGTATTGGCATGCGAAACGATTCCGTGTCTGACTGAAGCCAAAGCGATTG    538
                     |.|.|||||.||.||.||.||||||||||||.|.|||||.|||||||   
RBAM_002780__    489 TCTTTTGGCCTGTGAGACCATTCCGTGTCTGTCAGAAGCAAAAGCGA---    535

BSNT_00427___    539 TTC----GGCTGTTGAAGGAATTTCCTGAAACGTATGCATGGATCAGCTT    584
                      ||    |||||.||.|||||||.||.|..||.|||||||||||||||||
RBAM_002780__    536 -TCACAAGGCTGCTGGAGGAATTCCCCGGCACTTATGCATGGATCAGCTT    584

BSNT_00427___    585 CAGTGCTAAAGACGGCCTGCATATCAGTGACGGAACACC----TGCAGCT    630
                     |||.||.||||||||.|.|||||||||.||.||.||.||    |    |.
RBAM_002780__    585 CAGCGCCAAAGACGGACGGCATATCAGCGAAGGCACGCCAATTT----CC    630

BSNT_00427___    631 GACTGCGCATCATGGCTTGA----TGAACACCGCCAAATTGCAGCACTCG    676
                     ||.|||||..|...||||||    ||    |.|||||||.|||||..|||
RBAM_002780__    631 GAATGCGCGGCCCTGCTTGACTCCTG----CAGCCAAATCGCAGCGATCG    676

BSNT_00427___    677 GCATCAACTGCACGCCGCTTCAGCATATCCCTTCCTTGATAGAGGAGTTA    726
                     |||||||||||||.|||.||.|.|||||.||..|..|||||||.||   |
RBAM_002780__    677 GCATCAACTGCACACCGATTGAACATATTCCGCCGCTGATAGAAGA---A    723

BSNT_00427___    727 A--AAAAGAACA-CGTCAAAACCGATCATTGTCTACCCGAATTCAGGTGA    773
                     |  |||.|..|| |.||.||||||||.||.|.|||.|||||.||.||.||
RBAM_002780__    724 ATCAAACGGGCAGCATCCAAACCGATTATCGCCTATCCGAACTCCGGCGA    773

BSNT_00427___    774 GCAATATGATCCGGAAACAAAAACATGGAACGGCGCAGCATGCGCAGAAT    823
                     .||||||||.||.|..||||||||.|||||.||||||||.||||.|.|..
RBAM_002780__    774 ACAATATGACCCAGTGACAAAAACCTGGAAAGGCGCAGCGTGCGAAAACA    823

BSNT_00427___    824 CTTACGGGGCGAGCGCCCGCA--CCTGGCATGAAAAAGGAGCGAGGCTGA    871
                     .||.|||....||||  ||||  .||||.|.|||||.||.|.|||.||||
RBAM_002780__    824 ATTTCGGAAAAAGCG--CGCAAGGCTGGTACGAAAACGGCGTGAGCCTGA    871

BSNT_00427___    872 TTGGGGGCTGCTGTCGGACAAAACCCGAAAATATTCAAGAAATTGCGGCT    921
                     |.||.||||||||.|||||.|||||||...|.|||||.|..|||||.|.|
RBAM_002780__    872 TCGGCGGCTGCTGCCGGACGAAACCCGCGGACATTCAGGCCATTGCCGAT    921

BSNT_00427___    922 TGGGCCCGCTCTTTAAAAACAACTTGA    948
                     ||||||....|.|||||||||||||||
RBAM_002780__    922 TGGGCCAAGACCTTAAAAACAACTTGA    948


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