Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00407 and RBAM_002700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00407___pssA.1.9828.seq
# -bsequence dna-align/RBAM_002700___pssA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00407___pssA-RBAM_002700___pssA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00407___pssA-RBAM_002700___pssA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00407___pssA
# 2: RBAM_002700___pssA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 545
# Identity: 396/545 (72.7%)
# Similarity: 396/545 (72.7%)
# Gaps: 40/545 ( 7.3%)
# Score: 1485.5
#
#
#=======================================
BSNT_00407___ 1 ------------------ATGATTACGATAGGAAACTTCATTTGCGGATT 32
||||||||.||.|||||.||.||||||||..|
RBAM_002700__ 1 GTGAATTATATACCTAGTATGATTACAATTGGAAATTTTATTTGCGGGCT 50
BSNT_00407___ 33 GCTGGCGATTCATTCCTTGCTATATCACAACATTCATTCAGCAGTGCTTT 82
..|..|||||||||||.|..|.|||||.||.||.||.||.||.|||.|||
RBAM_002700__ 51 CTTATCGATTCATTCCCTTTTGTATCATAATATACACTCTGCGGTGATTT 100
BSNT_00407___ 83 TTATTTTTACAGGCATGTTCCTTGATTTCTTTGACGGGATGGCTGCTCGT 132
|||||||.||.||.|||||.||||||||||||||.||..||||.||.|||
RBAM_002700__ 101 TTATTTTCACCGGGATGTTTCTTGATTTCTTTGATGGTTTGGCCGCCCGT 150
BSNT_00407___ 133 AAGCTGAATGCCGTTTCTGATATGGGGAGAGAACTGGATTCGTTTGCCGA 182
||||||||.||.||.||.||.|||||.||.||.||.||.||.|||||.||
RBAM_002700__ 151 AAGCTGAACGCGGTATCGGAGATGGGAAGGGAGCTTGACTCTTTTGCTGA 200
BSNT_00407___ 183 TCTGGTTACGTTTGGGGTGGCTCCTTCTATGCTTGCTTACAGTGTCGCGT 232
|||.||.|||||.||.||.||.||.||.|||||.|||||||||||..|..
RBAM_002700__ 201 TCTCGTGACGTTCGGCGTTGCGCCGTCCATGCTCGCTTACAGTGTTTCAC 250
BSNT_00407___ 233 TGTATACCCTGCCATTTATCGGGATCTTA--TGCGCATTGACGTACAGCA 280
|.|||||..|.||.||.|||||.||.||| .||||.|| |.|||||.|
RBAM_002700__ 251 TATATACGATTCCGTTCATCGGAATTTTAATCGCGCTTT--CCTACAGTA 298
BSNT_00407___ 281 TTTGCGGAATGCTTCGCCTCTCTAAATTTAACATTGAACAAAGCAAGCTC 330
|.|||||.|||.|.||.||.||.|.||||||.|||||||||||||||||.
RBAM_002700__ 299 TCTGCGGGATGATCCGTCTTTCCAGATTTAATATTGAACAAAGCAAGCTG 348
BSNT_00407___ 331 CCGACGTTTATCGGTATGCCGATTCCGTTTGCGGGCATGTGTCTCGTTAT 380
||||||||||||||.||||||||||||||||||||.||||||||.||.||
RBAM_002700__ 349 CCGACGTTTATCGGGATGCCGATTCCGTTTGCGGGTATGTGTCTTGTCAT 398
BSNT_00407___ 381 TTTAAGCTTCACCTATAACCCGATCCTTCTGG---------CAATCGGCA 421
|||.|||||.|.|.|||||.|..|.||||||| |.|||
RBAM_002700__ 399 TTTGAGCTTTATCAATAACGCTTTTCTTCTGGGGGCGGGAACGATC---- 444
BSNT_00407___ 422 CTTGCGGACTCTCATATTTGATGGTGAGTAAAATAAAATTCCCTCATTTT 471
||| |||...|||||.|||||.||.||.||.|||||.||.||.|||
RBAM_002700__ 445 ---GCG--CTCGGTTATTTAATGGTCAGCAACATTAAATTTCCGCACTTT 489
BSNT_00407___ 472 AAAAAACATGCGGCAGAAAACCTGGAGTCTGGGAGATGGAATTAG 516
||||||||.|||.|.||||||||||||....|.||||||||||||
RBAM_002700__ 490 AAAAAACAGGCGCCTGAAAACCTGGAGAGCAGAAGATGGAATTAG 534
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