Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00378 and RBAM_002610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00378___glpT.1.9828.seq
# -bsequence dna-align/RBAM_002610___glpT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00378___glpT-RBAM_002610___glpT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00378___glpT-RBAM_002610___glpT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00378___glpT
# 2: RBAM_002610___glpT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1337
# Identity: 1104/1337 (82.6%)
# Similarity: 1104/1337 (82.6%)
# Gaps: 7/1337 ( 0.5%)
# Score: 4576.5
#
#
#=======================================
BSNT_00378___ 1 ATGCTT-AATATATTTAAACCGGCTCCTCATATTGAGAGACTGGATGATT 49
|||.|| ||| |.|||||.||||||||.||||||||||||.|||||||||
RBAM_002610__ 1 ATGTTTCAAT-TGTTTAAGCCGGCTCCGCATATTGAGAGATTGGATGATT 49
BSNT_00378___ 50 CAAAGATGGATGCGGCATACAAACGGCTCAGACTGCAAGTATTCATTGGT 99
||||||.|||||||||.||.|||||||||||.|||||||||||..|.||.
RBAM_002610__ 50 CAAAGACGGATGCGGCCTATAAACGGCTCAGGCTGCAAGTATTTTTGGGG 99
BSNT_00378___ 100 ATTTTCATTGGCTACGCAGGCTACTACCTGCTACGGAAAAACTTTGCCTT 149
||||||||.||.||.||.||.||.||..||||.||.||||||||||||||
RBAM_002610__ 100 ATTTTCATCGGGTATGCCGGGTATTATTTGCTTCGCAAAAACTTTGCCTT 149
BSNT_00378___ 150 TGCCATTCCTTATCTGCAGGAACAGGGATTTTCGAAAACAGAACTGGGTT 199
.||.||.||||||.|.||||||||.||.|||||.|||...|||||.||.|
RBAM_002610__ 150 CGCTATCCCTTATTTTCAGGAACAAGGTTTTTCAAAAGGGGAACTTGGCT 199
BSNT_00378___ 200 TGGTGCTGGCCGCTGTGTCCATTGCGTACGGCTTCAGCAAATTCATCATG 249
|||||||.||.||.||.||.||.||.|||||||||||.|||||.||.|||
RBAM_002610__ 200 TGGTGCTTGCGGCCGTATCAATCGCTTACGGCTTCAGTAAATTTATTATG 249
BSNT_00378___ 250 GGGATGGTGTCTGACCGCTGTAATCCGAGATATTTTCTGGCGACAGGCCT 299
||||||||||||||||||||.||.|||||.|||||.||.|||||.||.||
RBAM_002610__ 250 GGGATGGTGTCTGACCGCTGCAACCCGAGGTATTTCCTTGCGACGGGTCT 299
BSNT_00378___ 300 ATTTTTATCAGCAATCGTTAATATTCTATTCGTTTCAATGCCTTGGGTGA 349
.|||||.||||...||||.||.|||.||||.|||||.|||||.|||||.|
RBAM_002610__ 300 GTTTTTGTCAGGTGTCGTAAACATTTTATTTGTTTCCATGCCGTGGGTCA 349
BSNT_00378___ 350 CTTCGAGCGTCACCATCATGTTTATTTTTATGTTTATCAACGGATGGTTT 399
|.||.|||||.||.||.||||||||||||||||||||.||||||||||||
RBAM_002610__ 350 CGTCAAGCGTGACGATTATGTTTATTTTTATGTTTATTAACGGATGGTTT 399
BSNT_00378___ 400 CAAGGAATGGGCTGGCCGCCATGCGGCAGGACAATGGCCCATTGGTTCTC 449
||||||||||||||||||||.|||||..||||.|||||.||||||||.||
RBAM_002610__ 400 CAAGGAATGGGCTGGCCGCCTTGCGGACGGACGATGGCTCATTGGTTTTC 449
BSNT_00378___ 450 CATAAGTGAACGCGGCACAAAAATGTCGATCTGGAATGTCGCCCATAACA 499
|||.|||||||||||.||.|||||||||||.|||||||||||||||||||
RBAM_002610__ 450 CATCAGTGAACGCGGTACGAAAATGTCGATATGGAATGTCGCCCATAACA 499
BSNT_00378___ 500 TAGGCGGCGGTATTCTTGCTCCGCTTGTCACTCTTGGGATCGCGATGTTC 549
|||||||.||||||||.||.|||||.||.|||||.||.|||||.|||||.
RBAM_002610__ 500 TAGGCGGAGGTATTCTCGCCCCGCTCGTGACTCTCGGCATCGCCATGTTT 549
BSNT_00378___ 550 GTCACTTGGAAAAGCGTGTTTTTCTTCCCTGCCATCATCGCCATTATCAT 599
||.|||||||||||||||||||||||.||.||.||.||||||||..||||
RBAM_002610__ 550 GTTACTTGGAAAAGCGTGTTTTTCTTTCCGGCGATTATCGCCATCGTCAT 599
BSNT_00378___ 600 TTCATTTTTAATTGTTTTATTGGTTCGTGATACGCCTCAATCCTGCGGAC 649
|||||||.|.||||||.|..|.||.||.||.|||||.|||||||||||.|
RBAM_002610__ 600 TTCATTTGTGATTGTTCTTCTCGTACGGGACACGCCGCAATCCTGCGGGC 649
BSNT_00378___ 650 TCCCGCCAATTGAAGAGTATCGGAATGACTATCCAAAACACGCTTTTAAA 699
|.|||||.||||||||.||.||||||||||||||.|||||.||.||.|||
RBAM_002610__ 650 TTCCGCCGATTGAAGAATACCGGAATGACTATCCGAAACATGCGTTCAAA 699
BSNT_00378___ 700 AATCAGGAAAAAGAATTAACAACAAAAGAAATTCTTTTTCAATATGTGCT 749
.|.|||||||||||..|.||.||.||||||||||||||..||||.|||||
RBAM_002610__ 700 GACCAGGAAAAAGAGATGACGACCAAAGAAATTCTTTTCAAATACGTGCT 749
BSNT_00378___ 750 GAACAACAAATTTCTTTGGTACATCGCTTTTGCCAATGTATTTGTTTATT 799
|||.||.||.|||||.|||||.|||||.|||||||||||.||||||||||
RBAM_002610__ 750 GAATAATAAGTTTCTGTGGTATATCGCATTTGCCAATGTGTTTGTTTATT 799
BSNT_00378___ 800 TCGTGCGATACGGCGTGGTTGACTGGGCGCCTACTTACTTAACAGAAGCC 849
|.|||||.|||||.||.||||||||||||||.|||||.||.||.|||||.
RBAM_002610__ 800 TTGTGCGGTACGGTGTCGTTGACTGGGCGCCGACTTATTTGACGGAAGCG 849
BSNT_00378___ 850 AAAGGCTTTTCTCCTGAAGACTCGCGCTGGTCGTATTTTCTTTACGAATA 899
|||||.||.|||||||||||.||..|.|||||.|||||.|||||.|||||
RBAM_002610__ 850 AAAGGGTTCTCTCCTGAAGATTCCAGATGGTCTTATTTCCTTTATGAATA 899
BSNT_00378___ 900 CGCAGGCATACCGGGAACAATCTTGTGCGGCTGGATCAGTGACCGATTCT 949
.||.||.||.||||||||.||.|||||||||||||||||.|||||.||.|
RBAM_002610__ 900 TGCGGGAATTCCGGGAACGATTTTGTGCGGCTGGATCAGCGACCGGTTTT 949
BSNT_00378___ 950 TCAAAAGCCGCCGGGCACCGGCAGGCGTTTTGTTTATGGCGGGGGNCATT 999
|||||||||||||.||.|||||||||||..||||.|||||.||.| |||
RBAM_002610__ 950 TCAAAAGCCGCCGCGCGCCGGCAGGCGTACTGTTCATGGCCGGCGT-ATT 998
BSNT_00378___ 1000 ----GCCGTATTGGTGTACTGGCTGAATCCGGCCGGCAATCCGCTCGTAG 1045
||.||||||||.||||||||.||.||.|||||..||||||||.|.|
RBAM_002610__ 999 TATCGCTGTATTGGTCTACTGGCTTAACCCTGCCGGTCATCCGCTCATCG 1048
BSNT_00378___ 1046 ACAATATCGCCTTAATCAGCATTGGTTTCTTAATCTACGGACCTGTTATG 1095
|.||||||||..|.||||||||.||.|||||||||||.||||||||.|||
RBAM_002610__ 1049 ATAATATCGCGCTGATCAGCATCGGCTTCTTAATCTATGGACCTGTCATG 1098
BSNT_00378___ 1096 CTGATCGGCCTGCAAGCGATCGATCTAGCACCGAAAAAAGCAGCCGGAAC 1145
||||||||.||.||.||.||.||.||.||.||.||||||||.||.|||||
RBAM_002610__ 1099 CTGATCGGGCTTCAGGCCATTGACCTTGCGCCTAAAAAAGCGGCGGGAAC 1148
BSNT_00378___ 1146 TGCAGCCGGTTTGACCGGATTTTTCGGATACATCGGCGGATCCGCCTTCG 1195
.||||||||.||.|||||.||||||||.||||||||.||.||.||.||||
RBAM_002610__ 1149 GGCAGCCGGCTTAACCGGGTTTTTCGGCTACATCGGAGGCTCTGCTTTCG 1198
BSNT_00378___ 1196 CAAACGCCATTATGGGCTTTGTCGTTGACCGCTTTAATTGGAACGGCGGC 1245
|.||||||||.|||||.|.||||||.|||||||||.|.||||||||||||
RBAM_002610__ 1199 CCAACGCCATCATGGGTTATGTCGTAGACCGCTTTGACTGGAACGGCGGC 1248
BSNT_00378___ 1246 TTTATCATGCTGATCTCTTCCTGCATTCTTGCCATCGTCTTCTTGGCTTT 1295
|||||||||||.|||||.||.|||.|.||..|||||||||||||||||.|
RBAM_002610__ 1249 TTTATCATGCTTATCTCCTCATGCGTGCTGTCCATCGTCTTCTTGGCTAT 1298
BSNT_00378___ 1296 GACATGGAATACAGGAAAACGGGCAGAGCATGTTTAA 1332
|||.||||||||.||.||.|||||.||||||||.|||
RBAM_002610__ 1299 GACGTGGAATACGGGCAAGCGGGCGGAGCATGTGTAA 1335
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