Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00325 and RBAM_002200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence dna-align/BSNT_00325___ybbK.1.9828.seq
# -bsequence dna-align/RBAM_002200___ybbK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00325___ybbK-RBAM_002200___ybbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00325___ybbK-RBAM_002200___ybbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00325___ybbK
# 2: RBAM_002200___ybbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity: 346/472 (73.3%)
# Similarity: 346/472 (73.3%)
# Gaps: 35/472 ( 7.4%)
# Score: 1291.5
#
#
#=======================================
BSNT_00325___ 1 ATGATTCTAGTCAGTTCCTGCCTTGGAGGCATTGAATGCAGATATAACGG 50
|||||..|||||||.||.||.||.||.||.||.||||||||.||||||||
RBAM_002200__ 1 ATGATCTTAGTCAGCTCTTGTCTCGGCGGTATCGAATGCAGGTATAACGG 50
BSNT_00325___ 51 CTCTCACGCAGCGTCGGAGAAAATCAGAAAACTCGTCGATGAAAAGAAAG 100
|||||||||.||.|||||.||||||.|.|.||||||.||.||||||||||
RBAM_002200__ 51 CTCTCACGCCGCTTCGGAAAAAATCCGCAGACTCGTAGAAGAAAAGAAAG 100
BSNT_00325___ 101 CAGTTATGGCTTGCCCTGAACTTCTCGGCGGCTTCTCTACCCCACGCGAA 150
|.|||||||..|||||.||||||.|.|||||||||.|.||.||.||||||
RBAM_002200__ 101 CTGTTATGGTCTGCCCCGAACTTTTGGGCGGCTTCACCACTCCCCGCGAA 150
BSNT_00325___ 151 CCCGCAGAAATCATAGGAGGCACCGGCGAGGATGTCCTCAATGGAACAGC 200
||.||.||||||||.||.|||||.|||||.||.||.||.||.|||||.||
RBAM_002200__ 151 CCGGCGGAAATCATCGGCGGCACGGGCGAAGACGTGCTGAACGGAACGGC 200
BSNT_00325___ 201 GAAAATCGTGACAGCTTCAGGAGAAGACGTCACAGAACTATATATGGAAG 250
.|.||||||.||.||.||.||.||||||||.||.|...||||||||||.|
RBAM_002200__ 201 AAGAATCGTAACGGCATCCGGCGAAGACGTTACGGCTTTATATATGGACG 250
BSNT_00325___ 251 GCGCCGCGAAAACATTGGCTTACGCAAAAGAAAT--------CAACGCTT 292
||||.|..|||||.||.||.|||||||||||||| |||||
RBAM_002200__ 251 GCGCGGAAAAAACGTTAGCATACGCAAAAGAAATAGGCGCCGCAACG--- 297
BSNT_00325___ 293 CTGCCGTCATATTAAAAGAAAACAGTCCATCTTGCGGAAGCGGTTTTATC 342
|||||..|.||||||||||||||.||.|||||.|||.|.||||||
RBAM_002200__ 298 -----GTCATCCTTAAAGAAAACAGTCCGTCCTGCGGCAGCAGCTTTATC 342
BSNT_00325___ 343 TATAACGGCACATTCTCTGGCAAAAAAATCACCGGCAG-CGGAGTAACCG 391
|||.|||||||.|||||.||.||||||||.|.||| || |||..|.||..
RBAM_002200__ 343 TATGACGGCACTTTCTCAGGAAAAAAAATAATCGG-AGACGGCATCACTT 391
BSNT_00325___ 392 CCGCACTGTTAAAACAAGCGGGCTACCGCGTCATTTCGGAAAACGAGCTT 441
||||.||.|||||||..||.||||.|||.||..|.||.|||.|.||
RBAM_002200__ 392 CCGCTCTTTTAAAACGGGCAGGCTGCCGTGTTCTATCAGAAGATGA---- 437
BSNT_00325___ 442 AACGACAT-------ATTGTAA 456
|| |||.|||
RBAM_002200__ 438 ------ATTGGATCAATTATAA 453
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