Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00324 and RBAM_002190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence dna-align/BSNT_00324.1.9828.seq
# -bsequence dna-align/RBAM_002190___ybbJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00324-RBAM_002190___ybbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00324-RBAM_002190___ybbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00324
# 2: RBAM_002190___ybbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 340/510 (66.7%)
# Similarity: 340/510 (66.7%)
# Gaps: 60/510 (11.8%)
# Score: 1069.0
#
#
#=======================================
BSNT_00324 1 ATGACTCAAGACATTTCTTTATCCTTCTATAAGCCTGAACACTTGC--CC 48
||| ||..|..|..|.|||||.|||||.||.||.|| ||| .|
RBAM_002190__ 1 ATG------GATGTAGCCCTGTCCTTTTATAAACCGGAGCA--TGCAGAC 42
BSNT_00324 49 GAGCTCCAATCATTCACGCTCACCAACGATGACAAACGCTTTACCTCCCT 98
|.|||..|....||...|||.|...|.||.||.|||...||.||..|.||
RBAM_002190__ 43 GGGCTGAACGGGTTTGTGCTGAGTGAAGAAGATAAAAAGTTCACAGCTCT 92
BSNT_00324 99 CCCGAAAGAGGTGCTGTCTCAGGCTCTGGGCATACAGGACCGATACCCGG 148
||||||.||.||.|||.|.||||||||.|.|||.|.|||.||.||||||.
RBAM_002190__ 93 CCCGAAGGATGTACTGCCGCAGGCTCTTGTCATCCGGGATCGCTACCCGA 142
BSNT_00324 149 TTGTCATCTTAAAAGACGACCTTCCAGTCGGTTTTTTCATTTTACATGCA 198
..|||||.||||||||.||||..||.|||||||||||.|||||||||.|.
RBAM_002190__ 143 CAGTCATTTTAAAAGAAGACCGCCCCGTCGGTTTTTTTATTTTACATACC 192
BSNT_00324 199 TCAAAAGAAACGCTTGCTTCCTATTCTAACAAT-------CCATTTGCTT 241
|||||||||||..||||..|.|||||.|||||| ||||||
RBAM_002190__ 193 TCAAAAGAAACCATTGCCCCATATTCGAACAATGTGTCTGCCATTT---- 238
BSNT_00324 242 TACTGCTCAGCTCCCTGTCTTTAAACGCTGTGC---ATCACGGAAAAGGC 288
||||.||..|.|||||.|||.| ||.|| ||||.||||||||.
RBAM_002190__ 239 ---TGCTGAGTGCGCTGTCCTTACA---TGCGCCATATCAGGGAAAAGGT 282
BSNT_00324 289 TATGCGAAAAAAGCCATGCTTTTGCTTCCCGCTTTTGTGAGCGGA---TA 335
|||||.|||.||||.|||||...|||.||||||||||| ||.| ||
RBAM_002190__ 283 TATGCCAAACAAGCGATGCTGCAGCTCCCCGCTTTTGT---CGCAAATTA 329
BSNT_00324 336 TTTTCCATGGTGTGACGAAATCAT-CTTGGCCGTCAATCATC-TAAACAT 383
.|||||.||||||||.||||||.| ||| ||.||.||.|||| .||.|||
RBAM_002190__ 330 CTTTCCTTGGTGTGATGAAATCGTGCTT-GCTGTAAACCATCGCAATCAT 378
BSNT_00324 384 ACGCGCAAAACACCTTTATATGAAAAGCGGG--TTCC-------TTGATA 424
||.|||||..||||.|| |.|| |||| ||||||
RBAM_002190__ 379 -CGTGCAAAGAACCTGTA---------CCGGTCTTCCGGTTTTATTGATA 418
BSNT_00324 425 AAGGACGGCGAAGAATCGGCCCGCTTGGAGAACAGTTGATCCTTCATCAT 474
||||.||.||.||.||||||||..|.||.||||||...||.||.||||||
RBAM_002190__ 419 AAGGTCGTCGCAGGATCGGCCCCATCGGCGAACAGCACATTCTGCATCAT 468
BSNT_00324 475 TTCTTATAG- 483
||.||.| |
RBAM_002190__ 469 TTTTTGT-GA 477
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