Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00309 and RBAM_002100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00309.1.9828.seq
# -bsequence dna-align/RBAM_002100___feuC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00309-RBAM_002100___feuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00309-RBAM_002100___feuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00309
# 2: RBAM_002100___feuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1042
# Identity: 743/1042 (71.3%)
# Similarity: 743/1042 (71.3%)
# Gaps: 50/1042 ( 4.8%)
# Score: 2586.0
#
#
#=======================================
BSNT_00309 1 ------------ATGGCTAAAAAATATGCATTGTTCAGCGCTTTGAT--- 35
|||||...||..||| ||..||| ||||
RBAM_002100__ 1 GTGGTGCGTAAAATGGCCGGAATTTAT--ATCATTC-------TGATTGC 41
BSNT_00309 36 -----TCTTG-TTGTCAGCTATTTCAGCTTAACGAGCGGATCATTTTCTG 79
|.||| |.||.||||||||||||.|.||.|||||.||.|||||
RBAM_002100__ 42 TCTCATATTGCTCGTAAGCTATTTCAGCATGACAAGCGGTTCTTTTTC-- 89
BSNT_00309 80 TTCG----TCCTGCTGAGCTGCTCTCCACTCTTTTTCAAATCGACCCGAA 125
|| .||.|.|||.||||||...||.|||||.|..|||.|.|||||
RBAM_002100__ 90 --CGCAAAGCCGGGTGAACTGCTCAGTACCCTTTTCCGCATCCATCCGAA 137
BSNT_00309 126 TCCACAGTATGAAATTTTGCTGTTCGATTTAAGACTGCCGCGGGTTGTCA 175
|||.||.|||||.|||||||||||..|..|.||.||||||||..||||||
RBAM_002100__ 138 TCCGCAATATGACATTTTGCTGTTTCAGCTGAGGCTGCCGCGCATTGTCA 187
BSNT_00309 176 TGGCTGCTATTATTGGACTCGGTCTTGGCATTGCAGGCGCTGTTATCCAG 225
||||||||...||.||.|||||..|.||.||..|.||.||.|||||.|||
RBAM_002100__ 188 TGGCTGCTGCCATCGGGCTCGGATTGGGGATATCCGGAGCCGTTATTCAG 237
BSNT_00309 226 GCCATCACGAGAAACGGGCTTGCTGATCCTGGAATTCTCGGAATCAACGC 275
|||||.||.|.||||||.|||||.|||||.||.|||.|.||.||.||.||
RBAM_002100__ 238 GCCATTACCAAAAACGGTCTTGCCGATCCCGGTATTTTGGGCATTAATGC 287
BSNT_00309 276 AGGGGCAGGAGCCGGCATTGTAGCGTTTATGCTCTTATTCCAAGGCCAGA 325
|||.||.||||||||.||.||..||||||||||..|.||.||.||.||..
RBAM_002100__ 288 AGGAGCCGGAGCCGGAATCGTCACGTTTATGCTTCTGTTTCAGGGACAAT 337
BSNT_00309 326 AGGAAGTGACATCCATAGCTGCAGCGATGGGAATGCCGCTCTTTGGATTG 375
..||||.|||..|..|.||..|.||||||||.|||||..||||.||..|.
RBAM_002100__ 338 CTGAAGCGACGGCACTTGCCTCTGCGATGGGTATGCCTGTCTTCGGCCTC 387
BSNT_00309 376 ATAGGCGGGCTCATCGCGGCGATCCTGATTTACATATTTGCATGGCACAG 425
||.||.||..|.||.|||||..|.|||||.||.||.||.||.||||||.|
RBAM_002100__ 388 ATCGGAGGATTGATGGCGGCCGTGCTGATCTATATTTTCGCCTGGCACCG 437
BSNT_00309 426 AGGCAATTTAGATTCACGAAGAATTATTCTGGTAGGGATTGCGATCAATT 475
.||..||.|.||.||..|.|||||||||||.||.|||||.||.||.||||
RBAM_002100__ 438 GGGGCATCTGGAATCGGGCAGAATTATTCTCGTCGGGATCGCCATGAATT 487
BSNT_00309 476 CAGGATTCAGCGCCCTGTCTTTGTTTTTATCTTTAAAAATGGACCCGCAA 525
|.|||||||||||.||||||||.|||.|.||.|||||||||||||||||.
RBAM_002100__ 488 CCGGATTCAGCGCGCTGTCTTTATTTCTTTCATTAAAAATGGACCCGCAG 537
BSNT_00309 526 GACTATCAAATGGCCATGGTGTGGAAAAACGGAAGCATCTGGTCTGCCAA 575
||.|||.|.|||||.|||||.|||||||||||.|||||||||||.||.||
RBAM_002100__ 538 GATTATGAGATGGCGATGGTTTGGAAAAACGGCAGCATCTGGTCGGCAAA 587
BSNT_00309 576 CTGGACGTATATCACAGCCGTTCTCCCATGGATGCTGCTGTTTATACCGA 625
|||||.|...||.||.||..|.||.||.|||.||.|..||||.||.||..
RBAM_002100__ 588 CTGGATGACCATTACGGCGATCCTTCCGTGGCTGATCTTGTTCATTCCTC 637
BSNT_00309 626 TTCTTATCGGC--AAATCCCGCC--TGCTCGACACCATTCGTTTTGATGA 671
|.||||| ||| ||| ||.| ||||.||.|||||||||||.|||||
RBAM_002100__ 638 TGCTTAT-GGCGAAAA---CGTCATTGCTGGATACCATTCGTTTCGATGA 683
BSNT_00309 672 AGACACAGTCAGAAGCCTCGGCATTTCATCAAATAAAGAAAAAACCATCC 721
.|||||.||.|.|||||||||..|||||.|.||||||||||||||.||..
RBAM_002100__ 684 GGACACGGTGAAAAGCCTCGGTGTTTCAACCAATAAAGAAAAAACGATTT 733
BSNT_00309 722 TGCTCGTAGCCTGTGTAGCAATCATCAGCGCCTGTGTCTCCGTAGCGGGA 771
|.|||.|.|||||..|.||..|.||||||||.|||||..|||.||||||.
RBAM_002100__ 734 TACTCATTGCCTGCATCGCTTTGATCAGCGCATGTGTAACCGCAGCGGGC 783
BSNT_00309 772 AGCATGGCGTTTGTCGGCTTAATTGCTCCCCATATCTCACGGAGACTGGC 821
||||||||.||||||||..|.||.||.||||||||.||.||.||.||.||
RBAM_002100__ 784 AGCATGGCATTTGTCGGACTGATCGCGCCCCATATTTCCCGCAGGCTCGC 833
BSNT_00309 822 TGGCGTCGAACATCGCTATATCC--TGCCACTGAGCGGTTTAATCGGGAT 869
.||..|.||.||..| |||..| |.||..|.|||||.||..||||.||
RBAM_002100__ 834 CGGGATTGAGCACAG--ATACTCATTACCGGTCAGCGGATTGGTCGGTAT 881
BSNT_00309 870 GCTTCTTGTGATAAGCGCAGACTTTGCCGGAAAACTGTTTTTTCAGCCCG 919
|||.||.||.|||..|||.||||||||.||.|||.||||.||||||||..
RBAM_002100__ 882 GCTCCTCGTCATATCCGCCGACTTTGCGGGCAAATTGTTCTTTCAGCCTT 931
BSNT_00309 920 CAGAAGTGCCCGCAGGCATCATTTTGGCGATCCTCGGAGTTCCTTATTTC 969
||||||||||.||.||.||.|||.|.|||||.|||||.||||||||||||
RBAM_002100__ 932 CAGAAGTGCCGGCGGGAATTATTCTTGCGATTCTCGGCGTTCCTTATTTC 981
BSNT_00309 970 TTATATCTGCTTTTCAAGCAAAAAAAGGGGGAGAATGCTTGA 1011
||.|.|||.||.||.||||||||.||||||..|.||||.|||
RBAM_002100__ 982 TTTTTTCTTCTGTTTAAGCAAAAGAAGGGGCTGGATGCATGA 1023
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