Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00266 and RBAM_001830

See Amino acid alignment / Visit BSNT_00266 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence dna-align/BSNT_00266___ybaN.1.9828.seq
#    -bsequence dna-align/RBAM_001830___ybaN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00266___ybaN-RBAM_001830___ybaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00266___ybaN-RBAM_001830___ybaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00266___ybaN
# 2: RBAM_001830___ybaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 772
# Identity:     573/772 (74.2%)
# Similarity:   573/772 (74.2%)
# Gaps:          14/772 ( 1.8%)
# Score: 2080.0
# 
#
#=======================================

BSNT_00266___      1 GTGAATCACTTCTATGTGTGGCACATTAAACGGGTGAAACAATTAATTAT     50
                     ||||||||||||||.||.||||||||.|.|.||.|.|||||..|..||||
RBAM_001830__      1 GTGAATCACTTCTACGTATGGCACATCAGAAGGATAAAACAGCTGCTTAT     50

BSNT_00266___     51 TATACTTATCGCCGCATTTGCAGCTGCCAGCTTTTTTTATATCCAAAGAG    100
                     |||..|.||.||||||||||||||.|||||||||||||||||.||.||||
RBAM_001830__     51 TATTATCATTGCCGCATTTGCAGCAGCCAGCTTTTTTTATATACAGAGAG    100

BSNT_00266___    101 CTGTCCCGCTTCCCGTGTTTTCAACTGACACCGGACCTAAAGCCATTTAT    150
                     |.|||||.|||||.||.||||.||||||.|.|||.||.||.||.||||..
RBAM_001830__    101 CCGTCCCCCTTCCTGTATTTTTAACTGATAGCGGCCCGAAGGCTATTTCA    150

BSNT_00266___    151 AAAGGAGAAACAGATTCTAAA------GATATTTCACTTACTTTCGATAT    194
                     |||||.||.|      |.|||      ||..|..||.|.||.||||||||
RBAM_001830__    151 AAAGGGGAGA------CGAAAGCGGGCGAAGTCGCATTAACATTCGATAT    194

BSNT_00266___    195 CAGCTGGGGCGATGAGAGAGCAGAACCGATACTTAATACTCTGAAAGCAA    244
                     |||||||||||||||.|..||.|..|||||.||.||..|.||.|||||||
RBAM_001830__    195 CAGCTGGGGCGATGAAAAGGCGGTTCCGATTCTGAACGCGCTAAAAGCAA    244

BSNT_00266___    245 ACGGGATTAAAAATGCAACGTTTTTTCTTTCAGCTTCTTGGGCAGAACGC    294
                     ||||.||||||||.||.||.||||||||.||||||||||||||.|||||.
RBAM_001830__    245 ACGGTATTAAAAACGCCACTTTTTTTCTGTCAGCTTCTTGGGCGGAACGG    294

BSNT_00266___    295 CATCCCGACACAGTGGCCCGTATCGTAAAGGACGGCCATCAAATCGGGAG    344
                     ||.||.|||||.||.|..|||||.|||||.|||||.||||||||.||.||
RBAM_001830__    295 CACCCGGACACGGTTGAACGTATGGTAAAAGACGGACATCAAATAGGCAG    344

BSNT_00266___    345 CATGGGCTACGCTTATAAAAACTATGCCAATTTAGAGAGCAGCGAAATAA    394
                     ||||||.||.||.|||||.||.|||.||||..|||||..||..|||||||
RBAM_001830__    345 CATGGGATATGCGTATAAGAATTATACCAACCTAGAGGACAATGAAATAA    394

BSNT_00266___    395 AAAAGGACATGAACCGTGCGCAAACAGCCTTTGAAAAGTTAGGGGTCAAA    444
                     ||||.||.||...|||.||.||.||.||.|||.|||||.|.||.||.||.
RBAM_001830__    395 AAAAAGATATCCTCCGGGCCCAGACCGCATTTAAAAAGCTGGGTGTGAAG    444

BSNT_00266___    445 GACATACAGCTATTAAGACCCCCTACCGGCCAATTCAATAAGAATGTTCT    494
                     .|..|.||..||.|..|.||.||.|||||.|||||.|||||.||.|||||
RBAM_001830__    445 AATGTTCATTTACTCCGCCCGCCGACCGGACAATTTAATAAAAAGGTTCT    494

BSNT_00266___    495 AAAGGTCGCAAAGCAATACAATTATACAGTCGTTCATTACAGTGTGAACT    544
                     .|...|.|||.||||.|||.|.|||.||||.|||||||||||.||.||||
RBAM_001830__    495 TACCATTGCACAGCAGTACCACTATTCAGTGGTTCATTACAGCGTTAACT    544

BSNT_00266___    545 CTCAAGACTGGACAAATCCCGGAGTTGAAAAAATCATCGACAATGTGACC    594
                     |.||.||.||||||||||||||...|||.||||||||.||.|||||.|.|
RBAM_001830__    545 CGCAGGATTGGACAAATCCCGGCCCTGATAAAATCATTGAAAATGTAAAC    594

BSNT_00266___    595 AAGCAAGTTTCCGGTGGAGACATTATTCTTTTACATGCCTCCGATTCGGC    644
                     |..||..|....||.||.||||||.|.||..|.||.|||||.|||||.||
RBAM_001830__    595 AGTCATATAAAAGGCGGCGACATTGTCCTGCTGCACGCCTCTGATTCAGC    644

BSNT_00266___    645 AAAACAAACAGAAGAAGCATTGCCTGATATCATCCATCAGCTGAAAG-AA    693
                     ||.|||.||.||||||||..|.||.|..|||||||| ||..|.|||| ||
RBAM_001830__    645 AACACAGACTGAAGAAGCGCTCCCCGCCATCATCCA-CAATTTAAAGCAA    693

BSNT_00266___    694 AAAGGATTAAAAAATGTAACCGTGGGTGACCTCATCGCAAATTCTGATGC    743
                     ||||||.|.|||||.||.|||||.||.|||||.|||||||||.||||.|.
RBAM_001830__    694 AAAGGACTGAAAAACGTGACCGTCGGCGACCTGATCGCAAATACTGACGT    743

BSNT_00266___    744 CAAATCCGCAGAGGTAAAGTAA    765
                     |||.||..||||.||.||.|||
RBAM_001830__    744 CAAGTCATCAGAAGTGAAATAA    765


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00266 and RBAM_001830

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
