Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00254 and RBAM_001740

See Amino acid alignment / Visit BSNT_00254 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00254___rplM.1.9828.seq
#    -bsequence dna-align/RBAM_001740___rplM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00254___rplM-RBAM_001740___rplM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00254___rplM-RBAM_001740___rplM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00254___rplM
# 2: RBAM_001740___rplM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     428/438 (97.7%)
# Similarity:   428/438 (97.7%)
# Gaps:           0/438 ( 0.0%)
# Score: 2100.0
# 
#
#=======================================

BSNT_00254___      1 ATGCGTACAACACCTATGGCTAACGCAAGTACTATTGAACGCAAGTGGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001740__      1 ATGCGTACAACACCTATGGCTAACGCAAGTACTATTGAACGCAAGTGGTT     50

BSNT_00254___     51 AGTTGTTGATGCTGCTGGCAAGACTTTAGGTCGTCTTTCTTCAGAAGTTG    100
                     ||||||||||||.||.||||||||||||||.|||||||||.|||||||||
RBAM_001740__     51 AGTTGTTGATGCAGCAGGCAAGACTTTAGGACGTCTTTCTACAGAAGTTG    100

BSNT_00254___    101 CAGCTATCCTTCGCGGAAAACACAAACCAACTTACACACCACACGTTGAT    150
                     ||.|||||||||||||.|||||||||||.|||||||||||.|||||||||
RBAM_001740__    101 CATCTATCCTTCGCGGGAAACACAAACCGACTTACACACCGCACGTTGAT    150

BSNT_00254___    151 ACTGGAGATCATGTGATCATCATCAACGCTGAAAAAATCGAGTTAACTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001740__    151 ACTGGAGATCATGTGATCATCATCAACGCTGAAAAAATCGAGTTAACTGG    200

BSNT_00254___    201 TAAAAAGTTAACTGACAAAATCTACTACCGTCACACTCAACATCCAGGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001740__    201 TAAAAAGTTAACTGACAAAATCTACTACCGTCACACTCAACATCCAGGCG    250

BSNT_00254___    251 GATTAAAATCAAGAACTGCTCTTGAAATGCGTACAAACTACCCTGAGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001740__    251 GATTAAAATCAAGAACTGCTCTTGAAATGCGTACAAACTACCCTGAGAAA    300

BSNT_00254___    301 ATGCTTGAGCTTGCTATCAAAGGCATGCTTCCAAAAGGTTCTCTAGGTCG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001740__    301 ATGCTTGAGCTTGCTATCAAAGGCATGCTTCCAAAAGGTTCTCTAGGTCG    350

BSNT_00254___    351 TCAAATGTTCAAAAAATTGAACGTATACCGTGGTTCTGAGCATCCACACG    400
                     ||||||||||||.|||||||||||||||||||||||||||||||||||.|
RBAM_001740__    351 TCAAATGTTCAAGAAATTGAACGTATACCGTGGTTCTGAGCATCCACATG    400

BSNT_00254___    401 AAGCACAAAAACCTGAAGTTTACGAACTTCGCGGTTAA    438
                     ||||||||||||||||||||||||||||||||||||||
RBAM_001740__    401 AAGCACAAAAACCTGAAGTTTACGAACTTCGCGGTTAA    438


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