Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00251 and RBAM_001710

See Amino acid alignment / Visit BSNT_00251 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00251___ybaE.1.9828.seq
#    -bsequence dna-align/RBAM_001710___cbiO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00251___ybaE-RBAM_001710___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00251___ybaE-RBAM_001710___cbiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00251___ybaE
# 2: RBAM_001710___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 840
# Identity:     634/840 (75.5%)
# Similarity:   634/840 (75.5%)
# Gaps:          18/840 ( 2.1%)
# Score: 2333.0
# 
#
#=======================================

BSNT_00251___      1 ATGAAGACGCCGTTTGAGCGCCTAGCACTGTATGATATCAATGCATCGAT     50
                     ||||||||.||||||||.||.||.||.|||||||||||||||||...|||
RBAM_001710__      1 ATGAAGACACCGTTTGAACGGCTGGCTCTGTATGATATCAATGCCGTGAT     50

BSNT_00251___     51 TAAAGAAGGAAGCTACGTAGCCGTTATCGGGCATACAGGCTCTGGCAAGT    100
                     .|||||.||.||||||||.|||||.||||||||||||||.||.|||||.|
RBAM_001710__     51 AAAAGAGGGCAGCTACGTTGCCGTCATCGGGCATACAGGATCGGGCAAAT    100

BSNT_00251___    101 CCACTCTTCTTCAGCACCTAAATGGTCTCCTGAAGCCGACGAAGGGACAG    150
                     |.||.||.||.|||||..||||.|||.|.|||||.|||||.||.||||||
RBAM_001710__    101 CGACGCTCCTGCAGCATTTAAACGGTTTGCTGAAACCGACTAAAGGACAG    150

BSNT_00251___    151 ATATCACTAGGCAGCACTGTCATTCAGGCA---GGGAAAAAGAATAAAGA    197
                     .|...|||.|..|||||   .||||.||||   ||.||||||||||||||
RBAM_001710__    151 CTTGAACTCGAGAGCAC---GATTCTGGCAGCCGGTAAAAAGAATAAAGA    197

BSNT_00251___    198 TCTGAAAAAACTT--CGTAAAAAAGTCGGAATCGTTTTCCAATTTCCTGA    245
                     .||  .||.||||  ||.|||||||||||||||||||||||||||||.||
RBAM_001710__    198 CCT--TAAGACTTTGCGAAAAAAAGTCGGAATCGTTTTCCAATTTCCCGA    245

BSNT_00251___    246 GCATCAATTATTCGAAGAAACAGTTCTTAAAGATATTTCATTCGGACCGA    295
                     .|||||..|.||.|||||.||.||.||.||.||.||..||||||||||||
RBAM_001710__    246 ACATCAGCTGTTTGAAGAGACTGTGCTGAAGGACATCGCATTCGGACCGA    295

BSNT_00251___    296 TGAACTTTGGTGTTAAAAAAGAAGATGCGGAACAAAAAGCGAGAGAGATG    345
                     ||||.||.|||||.|||||||||||.||.||||..|||||.|.|||.|||
RBAM_001710__    296 TGAATTTCGGTGTAAAAAAAGAAGACGCTGAACGGAAAGCAAAAGAAATG    345

BSNT_00251___    346 CTGCAGCTTGTAGGTTTATCAGAAGAGCTTTTGGACAGGTCACCCTTTGA    395
                     |||..||||||.||..|..|.|||||..|||||||..|.|||||.|||||
RBAM_001710__    346 CTGGGGCTTGTGGGCCTTCCGGAAGACATTTTGGATCGTTCACCATTTGA    395

BSNT_00251___    396 ATTAAGCGGGGGACAAATGCGCAGAGTTGCAATTGCCGGCGTACTTGCAA    445
                     ..|.|||||.||.||.|||||||||||.||.|||||||||||.||.||.|
RBAM_001710__    396 GCTCAGCGGCGGCCAGATGCGCAGAGTGGCGATTGCCGGCGTTCTCGCGA    445

BSNT_00251___    446 TGGACCCTGAAGTGCTTGTTCTGGATGAACCGACTGCAGGATTGGACCCA    495
                     ||||.||.||||||||.|||.|||||||||||||.||.||..|.||.||.
RBAM_001710__    446 TGGAGCCGGAAGTGCTGGTTTTGGATGAACCGACGGCCGGTCTTGATCCG    495

BSNT_00251___    496 AGAGGGCGAAAAGAGATTATGGACATGTTTTATGAGCTTCATCAACGCGG    545
                     ||||||||..|.||.||||||||||||||.||||.|||||||||.||.||
RBAM_001710__    496 AGAGGGCGCCAGGAAATTATGGACATGTTCTATGCGCTTCATCAGCGGGG    545

BSNT_00251___    546 GAACCTGACGACGATCCTTGTGACACACAGCATGGAGGATGCAGCTGCAT    595
                     .||||||||.||..|.||.||.||.||||||||||||||.||.||....|
RBAM_001710__    546 AAACCTGACTACCGTTCTCGTCACCCACAGCATGGAGGACGCCGCCCGTT    595

BSNT_00251___    596 ACGCTGATGAAATGATTGTTATGCATAAAGGAACGATACAAGCATCAGGC    645
                     |.||.||.||.|||||.||.|||||.||||||||.||..||||..|.||.
RBAM_001710__    596 ATGCCGACGAGATGATCGTCATGCACAAAGGAACCATTAAAGCGACGGGG    645

BSNT_00251___    646 AGTCCGCGTGATCTGTTTTTAAAGGGTGAAGAGATGGCCGGCTGGGGGCT    695
                     |||||||||||..|||||.||||.||||||||||||.|||....|||.||
RBAM_001710__    646 AGTCCGCGTGACTTGTTTGTAAAAGGTGAAGAGATGTCCGAAATGGGACT    695

BSNT_00251___    696 GGATCTTCCTGAAACAATAAAATTCCAAAGACACCTTG---AAGCTGTAC    742
                     |||||||||||||.|..|.||.||.||.||||..||||   |.|||   |
RBAM_001710__    696 GGATCTTCCTGAATCGGTGAAGTTTCAGAGACGGCTTGAGAAGGCT---C    742

BSNT_00251___    743 TGGGTGTGAGATTTAATGAGCCTATGCTCACAATCGAAGATGCCGCTGCT    792
                     |.||.||.|..|.|.|..|.||.|||||.||..|..|.||||||||...|
RBAM_001710__    743 TCGGAGTCAAGTATGAAAAACCCATGCTGACCCTGCAGGATGCCGCCAGT    792

BSNT_00251___    793 GAAATCCGTGCTCTTTTTCAGGGGGAGAA-GACTTTATGA    831
                     |||||....|||.|.|||||||.|||.|| ||| ..||||
RBAM_001710__    793 GAAATTAAGGCTTTCTTTCAGGAGGAAAAGGAC-CAATGA    831


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