Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00249 and RBAM_001690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00249___rplQ.1.9828.seq
# -bsequence dna-align/RBAM_001690___rplQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00249___rplQ-RBAM_001690___rplQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00249___rplQ-RBAM_001690___rplQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00249___rplQ
# 2: RBAM_001690___rplQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 347/364 (95.3%)
# Similarity: 347/364 (95.3%)
# Gaps: 2/364 ( 0.5%)
# Score: 1655.0
#
#
#=======================================
BSNT_00249___ 1 ATGTCATACAGAAAACTAGGACGTACGAGTGCACAGCGTAAAGCTATGCT 50
||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_001690__ 1 ATGTCATACAGAAAACTAGGACGTACGAGTTCACAGCGTAAAGCTATGCT 50
BSNT_00249___ 51 TCGTGATCTTACAACTGATTTGATCATCAACGAAAGAATCGAAACAACTG 100
|||||||||||||||.|||||||||||||||||||||||.||||||||||
RBAM_001690__ 51 TCGTGATCTTACAACAGATTTGATCATCAACGAAAGAATTGAAACAACTG 100
BSNT_00249___ 101 AAACACGTGCGAAAGAACTTCGCTCTGTAGTTGAAAAAATGATCACGCTT 150
||||||||||||||||||||||||||||.||||||||.||||||||.|||
RBAM_001690__ 101 AAACACGTGCGAAAGAACTTCGCTCTGTTGTTGAAAAGATGATCACTCTT 150
BSNT_00249___ 151 GGCAAACGCGGTGATCTT-CACGCTCGTCGTCAAGCTGCTGCATACATCC 199
||.||.|||||||| ||| ||.||||||||||||||.|||||||||||.|
RBAM_001690__ 151 GGTAAGCGCGGTGA-CTTGCATGCTCGTCGTCAAGCAGCTGCATACATTC 199
BSNT_00249___ 200 GCAACGAGGTTGCAAACGAAGAAAATAACCAAGATGCACTTCAAAAATTA 249
|||||||||||||.||.|||||||||||||||||||||||||||||||||
RBAM_001690__ 200 GCAACGAGGTTGCTAATGAAGAAAATAACCAAGATGCACTTCAAAAATTA 249
BSNT_00249___ 250 TTCTCTGACATTGCAACTCGTTACGAGGAGCGCCAAGGCGGATACACACG 299
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001690__ 250 TTCTCTGACATTGCAACTCGTTACGAGGAGCGCCAAGGCGGATACACACG 299
BSNT_00249___ 300 TATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCAATTA 349
|||||||||||||||||||||||||||||||||.||||||||||||||.|
RBAM_001690__ 300 TATTATGAAGCTTGGTCCTCGCCGTGGTGACGGTGCACCAATGGCAATCA 349
BSNT_00249___ 350 TCGAATTGGTTTAA 363
||||||||||||||
RBAM_001690__ 350 TCGAATTGGTTTAA 363
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