Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00238 and RBAM_001590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00238___rpmD.1.9828.seq
# -bsequence dna-align/RBAM_001590___rpmD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00238___rpmD-RBAM_001590___rpmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00238___rpmD-RBAM_001590___rpmD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: RBAM_001590___rpmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 173/180 (96.1%)
# Similarity: 173/180 (96.1%)
# Gaps: 0/180 ( 0.0%)
# Score: 837.0
#
#
#=======================================
BSNT_00238___ 1 ATGGCTAAATTAGAAATTACCCTCAAACGAAGTGTAATCGGTCGCCCGGA 50
|||||||||||||||||||||||||||||.||||||||||||||||||||
RBAM_001590__ 1 ATGGCTAAATTAGAAATTACCCTCAAACGCAGTGTAATCGGTCGCCCGGA 50
BSNT_00238___ 51 AGACCAACGCGTTACTGTAAGAACACTTGGTTTAAAGAAAACAAACCAAA 100
|||.||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_001590__ 51 AGATCAGCGCGTTACTGTAAGAACACTTGGTTTAAAGAAAACAAACCAAA 100
BSNT_00238___ 101 CTGTTGTTCATGAAGACAACGCTGCGATCCGTGGTATGATTAATAAAGTA 150
||||.|||||||||||.||||||||||||||.||||||||||||||||||
RBAM_001590__ 101 CTGTCGTTCATGAAGATAACGCTGCGATCCGCGGTATGATTAATAAAGTA 150
BSNT_00238___ 151 TCTCATTTAGTTTCTGTTAAAGAACAATAA 180
||||||.|||||||||||||||||||||||
RBAM_001590__ 151 TCTCATCTAGTTTCTGTTAAAGAACAATAA 180
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