Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00237 and RBAM_001580

See Amino acid alignment / Visit BSNT_00237 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_00237___rpsE.1.9828.seq
#    -bsequence dna-align/RBAM_001580___rpsE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00237___rpsE-RBAM_001580___rpsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00237___rpsE-RBAM_001580___rpsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00237___rpsE
# 2: RBAM_001580___rpsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity:     492/507 (97.0%)
# Similarity:   492/507 (97.0%)
# Gaps:           0/507 ( 0.0%)
# Score: 2400.0
# 
#
#=======================================

BSNT_00237___      1 ATGATTATGCGTCGTATTGACCCAAGCAAATTAGAGTTAGAAGAACGCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001580__      1 ATGATTATGCGTCGTATTGACCCAAGCAAATTAGAGTTAGAAGAACGCTT     50

BSNT_00237___     51 AGTTACGGTTAACCGCGTAGCGAAAGTTGTTAAAGGTGGTCGTCGTTTCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001580__     51 AGTTACGGTTAACCGCGTAGCGAAAGTTGTTAAAGGTGGTCGTCGTTTCC    100

BSNT_00237___    101 GCTTCGCAGCTCTAGTCGTTGTCGGTGACAAAAACGGACACGTAGGATTC    150
                     |.|||||||||||||||||||||||||||||||||||.||||||||.|||
RBAM_001580__    101 GTTTCGCAGCTCTAGTCGTTGTCGGTGACAAAAACGGTCACGTAGGTTTC    150

BSNT_00237___    151 GGTACTGGTAAAGCACAAGAAGTACCAGAAGCGATCCGCAAAGCTGTTGA    200
                     ||||||||||||||||||||||||||.|||||.|||||||||||||||||
RBAM_001580__    151 GGTACTGGTAAAGCACAAGAAGTACCTGAAGCAATCCGCAAAGCTGTTGA    200

BSNT_00237___    201 AGATGCGAAAAAGAATTTGATTGAAGTACCAATGGTTGGAACTACAATTC    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_001580__    201 AGATGCGAAAAAGAATTTGATTGAAGTACCAATGGTTGGAACTACGATTC    250

BSNT_00237___    251 CACACGAAATCATCGGACGTTTCGGTGCAGGTAACATCTTGTTAAAACCT    300
                     |||||||||||||||||||||||||||||||.||.||||||||.||||||
RBAM_001580__    251 CACACGAAATCATCGGACGTTTCGGTGCAGGCAATATCTTGTTGAAACCT    300

BSNT_00237___    301 GCTTCTGAAGGTACTGGAGTTATCGCTGGAGGCCCTGTACGTGCGGTACT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001580__    301 GCTTCTGAAGGTACTGGAGTTATCGCTGGAGGCCCTGTACGTGCGGTACT    350

BSNT_00237___    351 TGAGCTAGCTGGTGTAGCTGATATCCTTTCTAAGTCTTTAGGTTCTAACA    400
                     ||||||.|||||.||.||||||||||||||||||||||||||||||||||
RBAM_001580__    351 TGAGCTTGCTGGCGTTGCTGATATCCTTTCTAAGTCTTTAGGTTCTAACA    400

BSNT_00237___    401 CACCGATCAACATGATTCGTGCAACACTTCAAGGTTTAAGTGAACTTAAA    450
                     ||||||||||||||||.||||||||||||||||||||||||||.||||||
RBAM_001580__    401 CACCGATCAACATGATCCGTGCAACACTTCAAGGTTTAAGTGAGCTTAAA    450

BSNT_00237___    451 CGTGCTGAAGACGTTGCGAAGCTTCGTGGAAAATCTGTAGAAGAACTGTT    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_001580__    451 CGTGCTGAAGAGGTTGCGAAGCTTCGTGGAAAATCTGTAGAAGAACTGTT    500

BSNT_00237___    501 AGGATAA    507
                     |||||||
RBAM_001580__    501 AGGATAA    507


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